Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1382 | AAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGACCCAAGAATCAACAGAAGACCGTTCACAGAAGAGGAAGAAGAGAGGTTACTCGCAGCTCATCGAATTCACGGGAACAAGTGGGCCCTCATAGCGAGGCTTTTTCCTGGTCGAACTGATAATGCTGTGAAGAACCACTGGCACGTTATAATGGCAAGAAAGCAGAGGGAACAATCGAAGTTATGTGGGAAAAGAAGTTTCCAAGATGTTTACAACGATTCCAACACGTTCCTCGAGAAGAGGACACCACAATCTCATCAAGACCTATTGTTTAGTACGAGATTTGGATTGGAGAATGGAAGATTCTTTGACTTTCGGAGCCTCGATAATAATAAGGATAATAACAATAATAATAATAGGATAGTTGCAGATACTACTCCCTCTAGTTCTCTGGCGTCTTGGAATTTTGCTTCTGTGCCAACAACCACAAACGGTTCTGCAGTAGTGGATAGGAAAGGAGGGAGAGACTATTTCAACGGTTCTTCTTGCTCTTCTAGTGTTTATCTCTCAGAATGTTCCAGAAGCTCAGATAGATCGTTTCTCAGAATTTATCCAAATCCTGCCTTCTCTCTTCCCAACTACAAGAGGGTTGTTCCAACAAGTCCTTTTAGTTTCCTTGGTTCTGATAATGATGGAAGGATAAAGAGGGACCTTTTGATGAGTTTTTGCGATAATAACTCATCCACATTCACCAAGTTGAAGGCTTCCACAGAGAAAGATCACCAACAACAAACAACTGAAGATGAGACCATTATCGAACCCAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTGGGTGTCTCTTCATCATAA | 846 | 0.4137 | KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNDSNTFLEKRTPQSHQDLLFSTRFGLENGRFFDFRSLDNNKDNNNNNNRIVADTTPSSSLASWNFASVPTTTNGSAVVDRKGGRDYFNGSSCSSSVYLSECSRSSDRSFLRIYPNPAFSLPNYKRVVPTSPFSFLGSDNDGRIKRDLLMSFCDNNSSTFTKLKASTEKDHQQQTTEDETIIEPKEVPFIDFLGVGVSSS* | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1382 | 281 | PANTHER | TRANSCRIPTION FACTOR MYB56 | 1 | 279 | - | - | |
Pvu9g1382 | 281 | Gene3D | - | 18 | 86 | - | - | |
Pvu9g1382 | 281 | CDD | SANT | 28 | 59 | IPR001005 | - | |
Pvu9g1382 | 281 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 12 | 66 | IPR017930 | - | |
Pvu9g1382 | 281 | SMART | sant | 16 | 64 | IPR001005 | - | |
Pvu9g1382 | 281 | ProSiteProfiles | Myb-like domain profile. | 12 | 62 | IPR001005 | - | |
Pvu9g1382 | 281 | PANTHER | MYB PROTEIN-RELATED | 1 | 279 | - | - | |
Pvu9g1382 | 281 | SUPERFAMILY | Homeodomain-like | 1 | 67 | IPR009057 | - | |
Pvu9g1382 | 281 | Pfam | Myb-like DNA-binding domain | 17 | 60 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1382 | Pvu-Chr9 | 19679666 | 19680527 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1382 | 1 | 72 | MYB Transcription Factor Family | AT1G17950 | 87.500 | 9.66e-42 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu9g1382 | Myb_DNA-binding | 2.4e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1382 | K09422 | - | gmx:100817328 | 429.483 |