Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1382 AAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGACCCAAGAATCAACAGAAGACCGTTCACAGAAGAGGAAGAAGAGAGGTTACTCGCAGCTCATCGAATTCACGGGAACAAGTGGGCCCTCATAGCGAGGCTTTTTCCTGGTCGAACTGATAATGCTGTGAAGAACCACTGGCACGTTATAATGGCAAGAAAGCAGAGGGAACAATCGAAGTTATGTGGGAAAAGAAGTTTCCAAGATGTTTACAACGATTCCAACACGTTCCTCGAGAAGAGGACACCACAATCTCATCAAGACCTATTGTTTAGTACGAGATTTGGATTGGAGAATGGAAGATTCTTTGACTTTCGGAGCCTCGATAATAATAAGGATAATAACAATAATAATAATAGGATAGTTGCAGATACTACTCCCTCTAGTTCTCTGGCGTCTTGGAATTTTGCTTCTGTGCCAACAACCACAAACGGTTCTGCAGTAGTGGATAGGAAAGGAGGGAGAGACTATTTCAACGGTTCTTCTTGCTCTTCTAGTGTTTATCTCTCAGAATGTTCCAGAAGCTCAGATAGATCGTTTCTCAGAATTTATCCAAATCCTGCCTTCTCTCTTCCCAACTACAAGAGGGTTGTTCCAACAAGTCCTTTTAGTTTCCTTGGTTCTGATAATGATGGAAGGATAAAGAGGGACCTTTTGATGAGTTTTTGCGATAATAACTCATCCACATTCACCAAGTTGAAGGCTTCCACAGAGAAAGATCACCAACAACAAACAACTGAAGATGAGACCATTATCGAACCCAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTGGGTGTCTCTTCATCATAA 846 0.4137 KSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNDSNTFLEKRTPQSHQDLLFSTRFGLENGRFFDFRSLDNNKDNNNNNNRIVADTTPSSSLASWNFASVPTTTNGSAVVDRKGGRDYFNGSSCSSSVYLSECSRSSDRSFLRIYPNPAFSLPNYKRVVPTSPFSFLGSDNDGRIKRDLLMSFCDNNSSTFTKLKASTEKDHQQQTTEDETIIEPKEVPFIDFLGVGVSSS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1382 281 PANTHER TRANSCRIPTION FACTOR MYB56 1 279 - -
Pvu9g1382 281 Gene3D - 18 86 - -
Pvu9g1382 281 CDD SANT 28 59 IPR001005 -
Pvu9g1382 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 66 IPR017930 -
Pvu9g1382 281 SMART sant 16 64 IPR001005 -
Pvu9g1382 281 ProSiteProfiles Myb-like domain profile. 12 62 IPR001005 -
Pvu9g1382 281 PANTHER MYB PROTEIN-RELATED 1 279 - -
Pvu9g1382 281 SUPERFAMILY Homeodomain-like 1 67 IPR009057 -
Pvu9g1382 281 Pfam Myb-like DNA-binding domain 17 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1382 Pvu-Chr9 19679666 19680527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1382 1 72 MYB Transcription Factor Family AT1G17950 87.500 9.66e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g1382 Myb_DNA-binding 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1382 K09422 - gmx:100817328 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1382 9 19679666 19680527 Pvu9g1382 9 19679666 19680527 ECH
Pvu9g1382 9 19679666 19680527 Pvu1g0665 1 8116183 8118029 PCT