Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1364 ATGCGTGTCCGTTTAAAGCAGCTGCTACTTGTTGTGCTCCTGGCTGCAGCAGCAGCAGCAGCTAAAACTCAACCTATGTCAAAGCCAAACTGCATAACAAAGTGTGGCAACGTCACCATTCCTTTTCCCTTTGGCCTCACAAAGCTCTGTTCTCTCAACACCTCATTTCTCATCACTTGCAACCATAACATTCCATTCTTGAAAACTTTTCATCAAGATGTGCGTATGCTTAACATCTCACTCGACGGCCAACTGGACGTTTCATTGCCAGTTGCCACAAGTTGCTTCAATAACAAGACAGATGAATTAAAGAACGACTTCTGGTCGTACAAATTCTACACACCTTTTCACCTTCCATCCAAGCAAAACAAGTTAACTGTATTGGGCGCTAACACTGCAGGAGTAGTAGAAGCTGTAGATTCAACATTCGAATACGCTACTTGTTTGTGCGTGTCTGTGTACAGTAGTATGATGGACGAGCCACCACATGACGAGTCATGCTCCGGCCGTTTTTGTTGCGAGACTCCAATTCGACAAAGGCTATCGGAATTCGATATTTATTCTCTACATATCTCCATAAATAACATGAACAAAACATTCCAGTCCTACCCATGTGGTTATGCATTTCTGGTTAAGGAGGGAGCCTACAATTTCTCCATGGCAAACCTGCGCAATTTTCACAGCAGCAGCACGTTTCCTGCGGTTATGGATTGGGCAGTGGGGAACACGTGCCTAGATGCTAAGAATAATGCTTCCAGTTATGCGTGTAAGTCAAACCACGGTGAATGTGACAATGCAAAGGAGGGACCTGGTTACCATTGTAAATGCTCCAGAGGTTTTCGTGGAAACGCATACCTACATGATGGTTGTGTAGATGTTGATGAATGCGCTGAAGGATTGCACGACTGTTTAAAGGGGAGATCAACATGCAGCAACAGTCCAACCGGGAGCTACAGTTGTTCTTGTCCAAAGGGATATGAAGGAGATGGGAAAAACAATGGAACCGGATGTCTTCGCAAGAGTAACAGCAAAATCATAATTGCTTTCAGTGTGAGTGGAAGTATATTGGCACTTGTGGGGGGAACCTTATACGTGTACTGTGCATTAAAGAAAAGAAAACTCAACAAACTTAAAGAACACTTTTTTGAACTAAACGGTGGCCTGTTATTACAACAGCAGATAGGCAGGTATGGTGGATCATCTGAAATGACAAAAATCTTTACTGTGGAAGAACTAAAAGAGGCCACCAGCAATTTCAATGAAGACATGGTTTTAGGGGAAGGTGGGCAGGGAACAGTTTACAAAGGAATATTACCTGATAATAGGATTGTAGCAATAAAAATGTCCAAAATTAGTAACCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTGCTTTGTCAAATCAATCACAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGAGACAGAAGTTCCCTTACTTGTTTATGAATTCGTTCCCAACGGAACTGTTTACGACCATCTATACGATCAAAGCCAATTTTTAAGACTTACCTGGAAAAGAAGATTACAAATAGCAACACAAACTGCTGGGGCCCTGGCATACTTGCATTCTGCTACCAATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAACTTCACTGCAAAGGTTTCTGATTTTGGAGCCTCAAGGATTATTCCTGTTGATCGAACTGAGTTAACCACTTTGGTGTTGGGGACACTGGGTTATCTTGACCCAGAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTAGCCGAACTACTAACAGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGATGCTCATAGAAACTTAGCGGTTCACTTCCATTCTTCAATGAATGAGGGTCAGTTACTTAACATTGTAGATAGCCGCATAATAGATGAGGCAAATGTTGAGCAATTAATGGATGTTGCCAATATTGCAAGCCACTGTTTGAGGTTGAAGGGGGAGGAAAGGCCCACCATGAGAGAAGTGGCAATAGAACTTGAAGGAATAAACATTGTGGAGAAGCACCAATGGGAAAAAGTCAACTTGTCGTCAGAGGAGACTGAAAATCTTCTCAAAGCAATACCATCATCTTCTTTTAGCATTGATGGTGTTAACAGAAGAAGCATTCCTTCTGGCTCTGATATTTCAAACCGAATTTCCTTGTCCTTAACTAGTGGAAGATGA 2253 0.4194 MRVRLKQLLLVVLLAAAAAAAKTQPMSKPNCITKCGNVTIPFPFGLTKLCSLNTSFLITCNHNIPFLKTFHQDVRMLNISLDGQLDVSLPVATSCFNNKTDELKNDFWSYKFYTPFHLPSKQNKLTVLGANTAGVVEAVDSTFEYATCLCVSVYSSMMDEPPHDESCSGRFCCETPIRQRLSEFDIYSLHISINNMNKTFQSYPCGYAFLVKEGAYNFSMANLRNFHSSSTFPAVMDWAVGNTCLDAKNNASSYACKSNHGECDNAKEGPGYHCKCSRGFRGNAYLHDGCVDVDECAEGLHDCLKGRSTCSNSPTGSYSCSCPKGYEGDGKNNGTGCLRKSNSKIIIAFSVSGSILALVGGTLYVYCALKKRKLNKLKEHFFELNGGLLLQQQIGRYGGSSEMTKIFTVEELKEATSNFNEDMVLGEGGQGTVYKGILPDNRIVAIKMSKISNPNQIEHFINEVILLCQINHRNVVKLLGCCLETEVPLLVYEFVPNGTVYDHLYDQSQFLRLTWKRRLQIATQTAGALAYLHSATNAPIVHRDVKTSNILLDHNFTAKVSDFGASRIIPVDRTELTTLVLGTLGYLDPEYFHSSQLTEKSDVYSFGVVLAELLTGKKALSFERPDAHRNLAVHFHSSMNEGQLLNIVDSRIIDEANVEQLMDVANIASHCLRLKGEERPTMREVAIELEGINIVEKHQWEKVNLSSEETENLLKAIPSSSFSIDGVNRRSIPSGSDISNRISLSLTSGR* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1364 750 Gene3D Laminin 242 294 - -
Pvu9g1364 750 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 14 728 - -
Pvu9g1364 750 Pfam Protein kinase domain 420 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1364 750 SMART egfca_6 292 338 IPR001881 GO:0005509
Pvu9g1364 750 Gene3D Phosphorylase Kinase; domain 1 396 494 - -
Pvu9g1364 750 SMART serkin_6 419 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1364 750 ProSiteProfiles EGF-like domain profile. 292 332 IPR000742 -
Pvu9g1364 750 CDD EGF_CA 292 329 - -
Pvu9g1364 750 Gene3D Laminin 295 332 - -
Pvu9g1364 750 SMART egf_5 243 291 IPR000742 -
Pvu9g1364 750 SMART egf_5 295 338 IPR000742 -
Pvu9g1364 750 Pfam Wall-associated receptor kinase galacturonan-binding 31 84 IPR025287 GO:0030247
Pvu9g1364 750 SUPERFAMILY EGF/Laminin 290 338 - -
Pvu9g1364 750 CDD STKc_IRAK 425 692 - -
Pvu9g1364 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Pvu9g1364 750 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1364 750 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 728 IPR045274 GO:0007166
Pvu9g1364 750 SUPERFAMILY Protein kinase-like (PK-like) 402 694 IPR011009 -
Pvu9g1364 750 Gene3D Transferase(Phosphotransferase) domain 1 495 714 - -
Pvu9g1364 750 Pfam Calcium-binding EGF domain 292 334 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1364 Pvu-Chr9 19468819 19471762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1364 1 714 Receptor kinase-like Gene Family AT1G21230 43.544 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu9g1364 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1364 - - vun:114162142 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0682 1 8490434 8494585 Pvu9g1364 9 19468819 19471762 PCT