Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1360 ATGTCAGTGCACTCTAAGCAGCTGCTACTGCAGGTGCTTCTTGTTGCCCTCCTTATTGCAAAAACTAAAACTCAAGCAATACCAAACCCAAACTGTTCATCAAAGTGTGGCGATGTCACCATTCCCTTCCCCTTCGGCATGTCCGACACTTGTTCCTTAGACACCTCTTTTCTCCTCACTTGCAACCAAACGTCTCCTTCATCACACACCCTTTTCCTGCCACAAACCAATATAACTGTGCTTAACATCTCACTCGACGGCCACATGCAAATTTCATGGCCTGTGGCCAGCGACTGCTACGCCGACAGAGGCAAACTCGTGAGGGAATCATTTCAAGACCTAAACCTCACAACTTTTCAAGTCTCTTCCAACAGAAACAGGTTGACTGTAATTGGGTGTGACACGTTTGGAATAGTGGTGGGAAGCGATTTGGAGGGAAAGAACTACACCATGGGATGCATTTCCTTGTGCAACAGGCTCCAAGACATCCAAACAAACGGGACTTGTTCCGGCACCGGTTGTTGCGAGACTTCGATCCCACGCGGGTTGTCGAGTTTCTCCTACGGTTCTGGGAGTTTGTTCAACCACACGGACGTAATGGAGTTCAACCCGTGCGGGTATGCGTTCCTGGTGGAAGATGGGGCCTACAATTTCTCCTCCACGGACCTCGTCAAGTTCGACAAAACCACGTTCCCCGTGGTGGTGGATTGGGCGGTTAAGAACCAAACGTGCGTAGAAGCTAAGAAAGAGGCTTCCAGTTACGCGTGCAAGGCAGAGAACAGTGATTGTTTCCATTCAGTTGAGGGATCTGATGTTAATGAATGCATGGGATCCAACGATTGCGTAGATGGGGCCAAATGCAGTAACTCTCCTGGTGGTTATAACTGTTTGTGCCCAAAAGGATTTGAAGGAGATGGACAAAAATATGGAACAAGATGCACTCACAAATCTACCATCAACTCAAGGAAAGAAATCATACTCATAATTGCTTTGAGTGTGAGTGTAAGCCTAGTGGCACTACTTGTGGGAAGCTTTTATGTGCATTGGGCATCAAAGAAAAGAAAGATCATTGAACTTAAAGAACAATTTTTTCAACAAAATGGTGGTCTTTTCTTACAACAACACATAATCAAGCATAAAGGATCAATTGAAACGGCTAAAGTCTTCACTGTAGAGGAGCTAAAAGACGCCACCGACAACTTTGATGAAGGCAAGATCCTTGGCCAAGGTGGTCAAGGAACAGTTTACAAAGGAGTATTGCTGGACAATAGAACTGTGGCAATTAAGAAGTCTAAAATCAGTGATCCAAATCAGATTGAGCAATTCATTAACGAGGTGATTGTGCTTTCCCAAATCAATCATAGGAATGTGGTAAAACTCTTGGGTTGTTGTTTGGAGACACAAGTTCCCATGCTTGTTTATGAATTCATTCCCAATGGTACTATTTATGAGCACCTTCATGATCATAATTGTTCTCTAAAACTTACATGGAAAACAAGGTTGAGAATAGCAACAGAAACAGCTGGGGCCATGGCTTATTTGCACTCTGCTACTTCTACACCAATCATACACAGAGATGTGAAAACTACAAATATTCTTCTTGATCATAATCTCATTGCAAAGGTTTCTGATTTTGGAGCATCAAGGATTTTCCCCCTTGATCAATCTCAACTAACCACTCTGGTGCAGGGAACATTAGGGTATCTTGATCCAGAATACTTTCATACAAGCCAATTGACAGAGAAGAGTGATGTCTATAGTTTTGGGGTTGTCCTTGCAGAGCTACTAACAGGGAAGAAGGCACTTTCATTTGATAGGCCAGAGGCTAATAGAAACCTTGCAGTGTACTTTGTTTCTTCAATGAAAACAGGCCAATTACATAACATTGTGGACAACCATATACTGCATGATGCAAATGTTGAGCAACTAACAGAAGTTGCCAATGTTGCAAATCGATGTTTAAAGGTGAAAGGAGAGGAAAGACCCACCATGAAAGAAGTGGCAATGGAACTTGAGGGACTTCAAATTATGGGAAAGCACAAATGGGAAAGTGTTAGTTCATCTTCAGAAGAGACCGAAAACTTCCTAAACTCGGCACCATCCATTCTTAGTGTTGAAAGTGGCATTAATTCAGGCTTTGATAGCTTAAACCAGATTTCTACGTCTTTGGGGGGTGGAAGATGA 2184 0.4318 MSVHSKQLLLQVLLVALLIAKTKTQAIPNPNCSSKCGDVTIPFPFGMSDTCSLDTSFLLTCNQTSPSSHTLFLPQTNITVLNISLDGHMQISWPVASDCYADRGKLVRESFQDLNLTTFQVSSNRNRLTVIGCDTFGIVVGSDLEGKNYTMGCISLCNRLQDIQTNGTCSGTGCCETSIPRGLSSFSYGSGSLFNHTDVMEFNPCGYAFLVEDGAYNFSSTDLVKFDKTTFPVVVDWAVKNQTCVEAKKEASSYACKAENSDCFHSVEGSDVNECMGSNDCVDGAKCSNSPGGYNCLCPKGFEGDGQKYGTRCTHKSTINSRKEIILIIALSVSVSLVALLVGSFYVHWASKKRKIIELKEQFFQQNGGLFLQQHIIKHKGSIETAKVFTVEELKDATDNFDEGKILGQGGQGTVYKGVLLDNRTVAIKKSKISDPNQIEQFINEVIVLSQINHRNVVKLLGCCLETQVPMLVYEFIPNGTIYEHLHDHNCSLKLTWKTRLRIATETAGAMAYLHSATSTPIIHRDVKTTNILLDHNLIAKVSDFGASRIFPLDQSQLTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFDRPEANRNLAVYFVSSMKTGQLHNIVDNHILHDANVEQLTEVANVANRCLKVKGEERPTMKEVAMELEGLQIMGKHKWESVSSSSEETENFLNSAPSILSVESGINSGFDSLNQISTSLGGGR* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1360 727 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 287 298 IPR000152 -
Pvu9g1360 727 ProSitePatterns Calcium-binding EGF-like domain signature. 271 296 IPR018097 GO:0005509
Pvu9g1360 727 SUPERFAMILY Protein kinase-like (PK-like) 384 672 IPR011009 -
Pvu9g1360 727 SMART serkin_6 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1360 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Pvu9g1360 727 Pfam Wall-associated receptor kinase galacturonan-binding 32 88 IPR025287 GO:0030247
Pvu9g1360 727 Pfam Calcium-binding EGF domain 271 313 IPR001881 GO:0005509
Pvu9g1360 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 14 709 - -
Pvu9g1360 727 Pfam Protein tyrosine and serine/threonine kinase 404 671 IPR001245 GO:0004672|GO:0006468
Pvu9g1360 727 ProSiteProfiles Protein kinase domain profile. 401 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1360 727 CDD STKc_IRAK 407 674 - -
Pvu9g1360 727 CDD EGF_CA 271 305 - -
Pvu9g1360 727 SUPERFAMILY EGF/Laminin 271 308 - -
Pvu9g1360 727 SMART egfca_6 271 314 IPR001881 GO:0005509
Pvu9g1360 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 709 IPR045274 GO:0007166
Pvu9g1360 727 Gene3D Transferase(Phosphotransferase) domain 1 477 696 - -
Pvu9g1360 727 Gene3D Laminin 270 315 - -
Pvu9g1360 727 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Pvu9g1360 727 ProSiteProfiles EGF-like domain profile. 271 314 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1360 Pvu-Chr9 19441516 19445058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1360 1 720 Receptor kinase-like Gene Family AT1G21230 44.016 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu9g1360 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1360 - - var:108330433 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0683 1 8501147 8504760 Pvu9g1360 9 19441516 19445058 PCT