Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1350 ATGCCTCCGCGGCGGTGCACGGCGTCTGCGGCGGCGGGGCAGACGGGGAGCGACAGCGACTTGGATGAGTTCATCATGCGGTGCCTCTCCTGCGAGGAGCAATACGACATGGACGACGCCGGAACCTGTAGGGAGTGCTACCAAGAGGCCAACGAGGCAGAGGAGGAGCTCCGCCTCGAGATCGACGACCTCAAGTCGAAGGTCTCCTTCCTCACACTCTCCTCTCCCACTCTCAATCCTTCTACCGCCGATATCGTCCTCGTTCCCGTCGACGACTCCGACGCCGCACCCATTCCCGCTCACAAGCACGTTCTGAGTTGTCGCTCTCCTGTTTTCAATGCAATGCTTGAGAATGATATGGAGGAAAGGCGGAGTGGCACCATCAAGATTTCTGATGTATCACATGATACCCTTTGTGCCTTTGTTAATTACTTATATACTGCCGAAGCGTCCCTTGATAACCAAATGGCCTGTAACCTGTTGGTTTTGGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATATTGTGAGAAATATTTGATCGCCAAAATGAATTGGAATAAGGCTATTGCAAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATCTTGGACAAAATGGATTTGTTCACTCAAAATGAATATTATGCCGAGCTCGTGGACACCAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTGGCAAGCAATTAAATACTGCAGGTACCCTTTAG 765 0.4902 MPPRRCTASAAAGQTGSDSDLDEFIMRCLSCEEQYDMDDAGTCRECYQEANEAEEELRLEIDDLKSKVSFLTLSSPTLNPSTADIVLVPVDDSDAAPIPAHKHVLSCRSPVFNAMLENDMEERRSGTIKISDVSHDTLCAFVNYLYTAEASLDNQMACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAIANYAFAYQYNCKQLRSASLAVILDKMDLFTQNEYYAELVDTNPRLVVEIYETYIGKQLNTAGTL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1350 254 PANTHER SPECKLE-TYPE POZ PROTEIN 21 251 - -
Pvu9g1350 254 Gene3D - 185 253 - -
Pvu9g1350 254 Coils Coil 47 67 - -
Pvu9g1350 254 SUPERFAMILY POZ domain 78 181 IPR011333 -
Pvu9g1350 254 Gene3D Potassium Channel Kv1.1; Chain A 50 184 IPR011333 -
Pvu9g1350 254 Pfam BTB/POZ domain 80 182 IPR000210 GO:0005515
Pvu9g1350 254 ProSiteProfiles BTB domain profile. 83 154 IPR000210 GO:0005515
Pvu9g1350 254 CDD BTB_POZ_ZBTB_KLHL-like 83 167 - -
Pvu9g1350 254 PANTHER GH01369P 21 251 - -
Pvu9g1350 254 SMART BTB_4 83 184 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu9g1350 BTB 2.5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1350 K10523 - gmx:100794118 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1350 9 19226652 19229748 Pvu9g1350 9 19226652 19229748 ECH