Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1346 ATGCCGCAAATGGGTCTCACCGGAGAACCCACCCGCGGAGGCTCAGGTGGCAGCACGGTGGTGGTCGGAGTAAAGATGGACTCCCCCAGCAAGGAATTGCTCACGTGGGCTTTGGTCAAAGTTGCTCACCCTGGTGACACCGTGGTTGCTCTGCATGTTCTTGGGAACCAGGAAACTGTGAATGGAGACGGGAAATCTTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCCGTTTATGAAGGATTCTGCAACTTGAAACAGGTCAACCTCAGACTCAAAATTTGCCGTGGTTCATCGGTGAAGAAAATTTTGGTTCGAGAAGCAAATGGTTCTTCCGCAACTCATGTTGTGGTTGGAACAACTCATGGTCTGCATAGAATCCGGTCATCTACCTTTGTAGCTAAATACTGTGCTAAAAAGTTATCCAAGGATTGTTGTGTTCTCGCTGTTAACAATAGGAAAGTTGTGTTCAAGCGTGACAGCTCGCCACCAAGTGTTGCTGACTTACAAGGGATTGATCGTCAACACAGAAATGGTTTGTTCGGTTCGATTCATTGGACACTCAGTAAGAACACAAAAGTTCTAAGTGATGACAATTCAGGGACGGATGCTGATGAGAAGAAACCTGTCCAAATTTCAGATCACAGTTTGGCTAAGTTTTTTCTGGATTCTACAGAAACTGTTAGAAAACCAAACTGTTCAATTTGTGGCACAACCCTGGCATGGCCAGACCCTTCTTGCTACCAGTCTGAAGAAAGCTTTTCTGGTGATGATGGTAAAGAGAATTCCTTGGCTATAGTACCTGTGCAAGTGAAACCCACTGTTGCAGCAAAAACGGAATCGAAACCTGGTTGGCCACTACTACACCGCGGAATTTTATCGGACACACAATCTACTGATAGATCATTGATGCATCCCCAGATCTCCGTGGTCCAGTGGGCAATGAGGTTACCTTCTAGAAATATTTCATACGCTGCAGATCGTGATGAAAAGCCTGAAAGTTGTGGTCAAGGTCTAGATCAACCTGCGGTTTTAGATAGGGAAAGTGGTGCGCTTGTTCCAGTAGATTCTGAAATAGGGACAGCTACTTCGCCTGAAGGCAATTCAAGAAACATTCCTAAAGAATTGGAGGGCCTTCATGAGAAGTACTCCTCGACTTGTAGATTGTTTGGGTACCAAGATCTTGTATCTGCCACATCAAATTTCTTACCGGAAAACTTTATTGGGAAAGGAGGAAGCAGTCAGGTTTACAGAGGTTGTCTTCGTGATGGCAAGGAACTTGCTGTCAAGATTCTAAAGCCTTCTGAAGATGTATTGAAGGAGTTTATTCTAGAAATAGAAATCATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTGGGATTCTGCTTTGAGAATGGCAAATTTCTTCTGGTTTATGATCTATTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAATAAGAAAACTTCAGTTGCGTTTGGTTGGTCGGAGAGATATAAGGTAGCAGTGGGTATTGCTGAGGCTTTAGATTATCTGCATTCTAAAGATGATCAACCCGTGATCCATCGGGATGTAAAGTCATCAAATGTGTTATTATCCGAGGATTTTGAACCCCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTCGTCATCGCATATAACCTGCACAGATGTTGCTGGAACCTTCGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATTGATGTTTATGCATTTGGTGTGGTGCTCCTTGAACTTCTTTCGGGGAGAAGGCCCATAAACCGTGATTATCCTAAAGGCCAAGAGAGTCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGAAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCATGAGGAGATGGAAAAGATGGTCTTGGCAGCCACACTCTGTATCAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACCTTATCTTAAAGCTCCTTCAAGGTGACACTGAAACAATGAAGTGGGCAAGGTTAGAAGTTAATAACGCTTTGGATGCAGCAGAAACGGTTGATGATGAAGCCTGTCCACCGAGTAATAATCTACAGTCACATATAAATGTTGCACTGGGTGATGTGGTGGATGATTCGGTCTCCATGTGCAGTGTTGAGCAAGGTTTGACATTGGAGGAGTACTTGAGAGGCCGTTGCAGCCGTGCATCAAGCTTTGACTGA 2262 0.4416 MPQMGLTGEPTRGGSGGSTVVVGVKMDSPSKELLTWALVKVAHPGDTVVALHVLGNQETVNGDGKSSLLSLVKAFDSVLAVYEGFCNLKQVNLRLKICRGSSVKKILVREANGSSATHVVVGTTHGLHRIRSSTFVAKYCAKKLSKDCCVLAVNNRKVVFKRDSSPPSVADLQGIDRQHRNGLFGSIHWTLSKNTKVLSDDNSGTDADEKKPVQISDHSLAKFFLDSTETVRKPNCSICGTTLAWPDPSCYQSEESFSGDDGKENSLAIVPVQVKPTVAAKTESKPGWPLLHRGILSDTQSTDRSLMHPQISVVQWAMRLPSRNISYAADRDEKPESCGQGLDQPAVLDRESGALVPVDSEIGTATSPEGNSRNIPKELEGLHEKYSSTCRLFGYQDLVSATSNFLPENFIGKGGSSQVYRGCLRDGKELAVKILKPSEDVLKEFILEIEIITTLHHKNIISLLGFCFENGKFLLVYDLLSRGSLEENLHGNKKTSVAFGWSERYKVAVGIAEALDYLHSKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRRPINRDYPKGQESLVMWASPILNSGKVLQLLDPSLGDNYDHEEMEKMVLAATLCIKRAPRARPQMNLILKLLQGDTETMKWARLEVNNALDAAETVDDEACPPSNNLQSHINVALGDVVDDSVSMCSVEQGLTLEEYLRGRCSRASSFD* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1346 753 Pfam Protein kinase domain 409 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1346 753 Pfam Universal stress protein family 19 150 IPR006016 -
Pvu9g1346 753 Gene3D HUPs 18 155 IPR014729 -
Pvu9g1346 753 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 152 - -
Pvu9g1346 753 PANTHER OS08G0249100 PROTEIN 10 735 - -
Pvu9g1346 753 Gene3D Phosphorylase Kinase; domain 1 371 479 - -
Pvu9g1346 753 CDD USP_Like 19 153 - -
Pvu9g1346 753 SMART serkin_6 405 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1346 753 ProSitePatterns Protein kinases ATP-binding region signature. 411 433 IPR017441 GO:0005524
Pvu9g1346 753 PANTHER - 10 735 - -
Pvu9g1346 753 SUPERFAMILY Protein kinase-like (PK-like) 386 676 IPR011009 -
Pvu9g1346 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Pvu9g1346 753 Gene3D Transferase(Phosphotransferase) domain 1 480 700 - -
Pvu9g1346 753 CDD STKc_IRAK 411 678 - -
Pvu9g1346 753 ProSiteProfiles Protein kinase domain profile. 405 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1346 Pvu-Chr9 19189030 19192973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1346 392 672 Trihelix Transcription Factor Family AT1G68690 44.056 1.69e-72 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu9g1346 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1346 - - aprc:113846853 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0697 1 8745310 8749855 Pvu9g1346 9 19189030 19192973 PCT