Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1345 ATGCAATTGTATCATCATGCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAAGCATTGATTATACATCACACCATGTCAATCCTGTAACTGGGAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCCGGTGGAAGACTCCCAGTTTTCCAAAATGGCTCTCACATCCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCAGTGTTCTCCTCTGGGTCTGAAAATATCACTAGCAGTAACAAGGAAGTGATTGAATGGATGCAGAAGGTACAGGAGTGGAATCCTAAGTATTTTTCCCTTTCCCATGTTCCAGAGAAATACAGAATATATGTTTCTAAGTTCTTAAGGAGAGTGGCGATTGCTCGAATGTCCGAGTCTCCAGAATTAGCAGGTGCTTACCATAGGAAGTTAAAAGAAGCCTATCAGACTGAAGAGAAATTGAAAGAGTCAGATGTGTTGATAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAGGCAACTGAGTGAAACTCCTTATTTGGCAGGTCAAGAGTTTACTATGGCTGATGTGATGCTCATTCCAGTGTTGTCTCGTTTAGTTCTCTTGGATTTAGAGAATGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGGTTTTGGTTCAGCAGAGGCCTAGTTATAGGAAGGTGATTGGTAGATATTTTGATGGTTGGAAAAAGCATAAGACACTGTTAAAAACTTGGTGCTTTGTTCGTCTTAGAAGTTTGCTGAAGAGATTCTAG 804 0.403 MQLYHHAFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENITSSNKEVIEWMQKVQEWNPKYFSLSHVPEKYRIYVSKFLRRVAIARMSESPELAGAYHRKLKEAYQTEEKLKESDVLIRSKEHLIRLLDEAERQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLENEYITGRPNIAEYWVLVQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRLRSLLKRF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1345 267 Pfam Glutathione S-transferase, C-terminal domain 165 224 - -
Pvu9g1345 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Pvu9g1345 267 CDD GST_N_family 1 73 - -
Pvu9g1345 267 SUPERFAMILY GST C-terminal domain-like 157 239 IPR036282 -
Pvu9g1345 267 Gene3D - 130 238 - -
Pvu9g1345 267 CDD GST_C_family 164 225 - -
Pvu9g1345 267 Pfam Glutathione S-transferase, N-terminal domain 12 74 IPR004045 -
Pvu9g1345 267 Gene3D Glutaredoxin 1 75 - -
Pvu9g1345 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Pvu9g1345 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 252 IPR010987 -
Pvu9g1345 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1345 Pvu-Chr9 19175521 19178972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1345 1 267 Glutathione S-transferase Gene Family AT1G77290 67.041 1.41e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1345 K22077 - gmx:100792543 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1345 9 19175521 19178972 Pvu9g1345 9 19175521 19178972 ECH
Pvu1g0702 1 8874861 8877522 Pvu9g1345 9 19175521 19178972 PCT