Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1344 ATGATTGAGATGGGGTCGTGTGGGAGATCTGTTACCGCTAATGATCGCTCTGGAGGGTCTGTTATTGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGTTGTTTCTGTACAGGAGTCTTGTTTGGAAGAGGCCTGCAATGTTGTGGACTCTAATGCTGACCTCTCCACTGTGACTGATGGTTGTGTGGGAGAGGACCTTGTGGGTTCTGCAAGGTGTCTAGGTGAGGGGTCTTGCGATGCTTTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGTCACTGGAGAAAACCACCGAAGATGATTATCTGAATTGTTTGGGGGTTTCTTATGGGGGCATCGAAGTTCCCTGTGAAAGCAGTGTCTTTGAGGGGAATGTTCAGGGTGAGGGAAACTTTGATTTGCGGTCACGGTCTTTGACCACTGATGATTCACAGAGGCTTTGTTCTCAACAATCACCTGCAACAGGAAATCAGTCCGTCGTTGTTGAAGGAGAAATCGATGACACTGGTCTTGGTGATGCTTTCAATCATGTTCTTGATTTCAGAGATTCTGAAATGTCTTTGGAATTAGAATCTGTGGCTGACTTGTTAGTTGATTGCAACCAGCAAAATGAGCAGCAGGAAATTATGAGAAATGCAGACCCCTTGTTGAATGTTGTGGAAAATTGTGATGCTTTAATTGGGACTGAAGCTGCTGCTTGCAGGCAGATATCTCCTACCTTGGATATGGAAGTGCCATCTGGTGCGTTATGTGCGGATACAGAAGTAGAGAGCACAAGTGATCTGAAAGATGGTGAGGACCAGAATAGTACTTGCGAAGAAAAGGCTAAAGATTTTGTTGATGAAGAAATCATTTTCATTAATTCATGTGTAAAAATATCTTCGTCTCCAGGTTGCCATGGGACTGTTGACAGCTCATCTGTAGATTCTCCTTGTGAGCCTGCCTTGTTGGATGCAGGGCGTGAAATGAAGAATGCTGTACTACAAATAGAAGATGCTTTCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTAGCAACTCTACCTTTAGAAAGCCATCTTCTCCAGAATCAGGCATGCCCTCTGTTGCTTCAATTGCCAACTTCTCTTCAAAGGATGTTTCTGATTTCCATTGTAAGGGTGATGATGTGGGCAACTCTACCTTTAGAAAGCCATCTACTCCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTGCTCTTCAAAGGATGTTTCTGACCTCCATTGTAATGGTGATGTTTCTACTACCACTACTATTGCTACTAATAATGCTGTGGACGATCTGGGGCAGATGGATAATGATGGAAAAGAAGCAGTTGAAGTTGATTGTATCACTGAAAGCATTCCATTACTTTCTCAACGGAATAGTCGAAGAAGTAAAGTAGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAGAGGAAAAAACAAAACCAAGGTGACATGTCCAAATGGGGATTATATGAAGTTATACTCAGAGGCTGCCAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATCAATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCGTGCAGTCGGTGAAGCTGTGTGCCAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATAAAGCAAGTACTGGCTCACTGAGTTCAGTACAGAAGTGCCCTATTTCAACCTCTCGTGTTCGTCTAAAGATCAAATTTGGGAAAGAACCTGATTTATGTTGCTCAAATGTCTTGTCTCCAGACTCTGTTGAAGGCTTGGCTTCTGCTTCCCACTTGGAGTCTGGTTCAGCTTCTGAGAAAATAGCCTGCAATCTCGAAGATAAAATGTTGAAAGTGGTGACATTGGGCAATTCAGAATCTTTCAACAATGACCTGGATAAGGATGATCTTGTTCGAAATGAACAAGTGGCTAATAGCCCCTTAGAAGAAAATACTGAAATAACTGAGAAGGCAGATGGGGACGTAGAGGAACATTGTCTTGCAGTTCCTCCAGAGAAGGTGGTTGAAGCTTTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACTTCACCTGATTCTGAAGTTATCAATTCAATTCCTGAAATCCAGGTTGTAGAGAGACATCAAGAAGATTTACATGATGCTGTTTTAGGTTCTTCTAAAGAGTTAAATTCTAAATTGGATGCTACCATCAGTAGAAGAGGGAAGAAGAAAGACAAACTTATCTGTTCAGGTATTTGTATCACTGAAGATGAATGCCAAGGTCCGCCTAGAAACAGTAGAGGTAAGCAGTCAAAGAACCGCAGGGGTAAGAAAAATTGTAGAGATGCAGTTAGCTCTTTGGAATTGTCTACTTTCACTCAGATGACAAAATCTGTGAGCAGTAAAGAATTGTGCCCAGAATCATTGTCCCTTTCTGGAGAGACTGAACTTGGAGGCTCTTCTGAGGCTTTGAAAGTTAAAAATGACATGATAAGTGGAAAACAATCAGTTGACAATGGATTTTCAGAATCTCAAGTTTCTGAAAATATGCTGTCTTCTGCAACACCTTTGGGTCGTAAACTACCTAAAAGTCTTAAACCTAGTAAAGTTAGTAGGACCAAATTTAAAGCTTCTGACTCGGCTGACAGGAAAAAGACTACATGTACACGCAAGGAGAAACAGAAAAAGCCAATTAATAAGTCTGAAGTCAAGAGAAAAGGTGCCTCTCTTAAAATTACATGTGAAATGGAAGATCGCCCACATGCAGATGCAAATATTGGAAATTATAAGTTGGATGCTGTCGGAAAAATTAATGCTGAGGACAACAAAGTATCAGTCAACATATCTAAATTAGACACGCTGTCTGGTGTTGAACTGGGTGGGCAACTTCCATCTCCCCGTAATGCGTGGGTGCGATGTGATGATTGTTACAAGTGGAGGCGAATTCCAGCTGTGCTTGCAGACCTAATTGATGAAACTAACCGTACCTGGACATGTAAGGACAGCAGTGATAGTGCCTTTGCTGACTGTGCTGTTCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCCGGTGAAGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCATTTGTTTCCCAGGGGTCAACTTTTACCCATATTTTTACCAATGAATTCCTACACCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGGCGTCTCAAGAAGGAAAGTTAGGCTGTGGTGATGAATGCCTAAATCGGATGCTTAATATTGAATGTGTACAAGGAACATGCCCGTGTGGGGACCGTTGTTCTAACCAGCAGTTCCAAAAACGCAAGTATGCTAATCTGAGGTGGTTTAAATGTGGGAAAAAGGGATATGGACTAAAGGCACTTGGGAATGTAGCTCAAGGCCAGTTTCTTATTGAATATGTTGGAGAGGTGCTTGATATGCATACGTATGAGGCACGGCAAAGGGAATATGCTTTGAAGGGTCATCGGCATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCTAGTGCGAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACCGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAATTGACGTTTGACTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTAGTTCACCTAGTTGTCGAGGTTATATAGGTGGCGGTGATCCACTTAATGCTGACCTGATAGTTCAAAGTGATTCAGAAGAAGAATTCCCAGAACCTGTTATGCTTTCCAAAGATGGTAAAATTGAAGATGCTGTACCCATACCCAAGTATTTTAGTAATGTTGATACACAGTCTGCCAGAAATATGTTAAAAGGCAGGGATATATTGGAAAAGTCTACAACTGCTATAGATTCGGATGGTTCTCCAGAGAAAGAAAGTTCCGTGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCCCAGCAGAAATGGAGGATTCAAAGGGCAAGTTACCCTTTTCTGTTGAAGTTGAAGAAATTTCTCAACAGATGGAGGATGTAACAAGCAAACCCATGTCCACCGAACAAGGATATGAAAAGGAAAAGGAATCAGAGTTTGCAGACAAAACTTCCTCCACTCAAAGATTAGAGACTACTTCTCCCCTTACAACTGCTAGCAAAATGTTATCTAATTCTGGTAGTAATAAGGAGTCCAAGTCTGAAATAATTGAAGGCAGGAAGAATTCTAAGTTAAAGAGTTCTGTTAAAAAAGGAAAGGTTCATGCTAATCTTCCAAATGGCCTTAAAGCTGAGGTGTCAGCCAATCGATTGCAGTTGTCATCTGTTAAACACAAAAAACTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTAGATGGAGATGGGGGAATAAGCAAAAGAAAGGACGCCACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCTGGTGATAGAAGCAACGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATACTGCGAAAGCTTCTTAAGGTCTTAGAGTACCTAGCAGCAAGCAAAATTTTGACACCTGAACAGATTAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTCGAGAGTCAATGCTTTCTCTGACAGAGCATGATGACAAGCAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCTAACAGAAAACATGGCTATTTGGACAGGGATGATAATAGAATGGAATCTAACAGAAGTTTCAGTGGTAGCAGATTTTCAGCATCACACAGTCATAGACCTGAGCAGGATTTAAGGGCTGCAGAAGTAATTGACTGTAGTCAGCAGTCTATGCTCGGGACAACTCCAGTAGATGCTGATACACAGGAAAGCTGTCCTGCCCACTCTCTAGATGGGGTTGAAATCAAAGGAGCTAAAAAACGGAAGCGCAAAAGCCGATGGGATCAACCGGCAGAGACAAACTCACTTTCTGATGCCGTTATGAGCTCCATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAATAGGTCCATTAAATGCTTCTGCCCTAAACTCTGGTAATCTTGTATTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATTCAGTAGTTGGTCATTCGAAAAGGAAATTTAATTCTCGCTTGCCTGTGGCATATGGAATGCCATGGTCTGTTGCCCACCAATATGGAACACCTCATACTGAATTTCCAGAGCGTTGGGTCACTGCACCTGGCATACCTTTCATTCCATTTCCTCCACTACCCCCATATCCTCGGGACAACAAAGACTGTCAACCTTCTAATAATAATAGTGCTATGATAATTGATCTGCCTGCTGAAGCTATGATAAGTGATCAGTCTGCTGAAGTTAAGGAGGGTCATAACAGTAGTATGGTCAGTTGTTGTGCAGATGATATGATTCCCAGCACAACTGGTGCTAATCCTGAAGAGTCGAACCTTCTGTTCGAGGAAAACGAAGCTAAACGAATGAAGGGTGACTCCCATGATTTGGTAAGGAAGTATTATAAACAGCAGAAATGGAATAACTCGAAAATACATCGACCATGGTTCCAGAGGAATGCATGGAAATGTAATGAGAACAACTCTAGTGGTGATATGTGCAGTATAGATGTAGATTTACCAAAAGAGTCGGAAGATACTTGTGATGCGGAGAATGCAATCTGTAGAGAGGAGAAAGGTGGTAATAATATTTATTAG 6054 0.4187 MIEMGSCGRSVTANDRSGGSVIEQHLCSEVAEQVVSVQESCLEEACNVVDSNADLSTVTDGCVGEDLVGSARCLGEGSCDALGLASECENADLLSLEKTTEDDYLNCLGVSYGGIEVPCESSVFEGNVQGEGNFDLRSRSLTTDDSQRLCSQQSPATGNQSVVVEGEIDDTGLGDAFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVENCDALIGTEAAACRQISPTLDMEVPSGALCADTEVESTSDLKDGEDQNSTCEEKAKDFVDEEIIFINSCVKISSSPGCHGTVDSSSVDSPCEPALLDAGREMKNAVLQIEDAFCKLKDCSSEETSNSTFRKPSSPESGMPSVASIANFSSKDVSDFHCKGDDVGNSTFRKPSTPESGLPSVASIANCSSKDVSDLHCNGDVSTTTTIATNNAVDDLGQMDNDGKEAVEVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTCPNGDYMKLYSEAARKKRSCFSKPARSSIWGSIGNIEQFFEQDNERAVGEAVCQLGKARSKRQSGKAVKNKASTGSLSSVQKCPISTSRVRLKIKFGKEPDLCCSNVLSPDSVEGLASASHLESGSASEKIACNLEDKMLKVVTLGNSESFNNDLDKDDLVRNEQVANSPLEENTEITEKADGDVEEHCLAVPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEIQVVERHQEDLHDAVLGSSKELNSKLDATISRRGKKKDKLICSGICITEDECQGPPRNSRGKQSKNRRGKKNCRDAVSSLELSTFTQMTKSVSSKELCPESLSLSGETELGGSSEALKVKNDMISGKQSVDNGFSESQVSENMLSSATPLGRKLPKSLKPSKVSRTKFKASDSADRKKTTCTRKEKQKKPINKSEVKRKGASLKITCEMEDRPHADANIGNYKLDAVGKINAEDNKVSVNISKLDTLSGVELGGQLPSPRNAWVRCDDCYKWRRIPAVLADLIDETNRTWTCKDSSDSAFADCAVPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFVSQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKASQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYANLRWFKCGKKGYGLKALGNVAQGQFLIEYVGEVLDMHTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCSSPSCRGYIGGGDPLNADLIVQSDSEEEFPEPVMLSKDGKIEDAVPIPKYFSNVDTQSARNMLKGRDILEKSTTAIDSDGSPEKESSVNPASAVSLLHSPAEMEDSKGKLPFSVEVEEISQQMEDVTSKPMSTEQGYEKEKESEFADKTSSTQRLETTSPLTTASKMLSNSGSNKESKSEIIEGRKNSKLKSSVKKGKVHANLPNGLKAEVSANRLQLSSVKHKKLEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESNRSFSGSRFSASHSHRPEQDLRAAEVIDCSQQSMLGTTPVDADTQESCPAHSLDGVEIKGAKKRKRKSRWDQPAETNSLSDAVMSSIGESQNIHEDVPPGFSCPIGPLNASALNSGNLVLQNASRSGCPSDSVVGHSKRKFNSRLPVAYGMPWSVAHQYGTPHTEFPERWVTAPGIPFIPFPPLPPYPRDNKDCQPSNNNSAMIIDLPAEAMISDQSAEVKEGHNSSMVSCCADDMIPSTTGANPEESNLLFEENEAKRMKGDSHDLVRKYYKQQKWNNSKIHRPWFQRNAWKCNENNSSGDMCSIDVDLPKESEDTCDAENAICREEKGGNNIY* 2018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1673 1699 - -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 465 490 - -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1393 1469 - -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 847 865 - -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1422 1449 - -
Pvu9g1344 2017 Gene3D SET domain 1038 1290 IPR046341 -
Pvu9g1344 2017 SMART shorttest3 1089 1140 IPR006560 GO:0005634|GO:0018024
Pvu9g1344 2017 ProSiteProfiles Zinc finger CW-type profile. 975 1029 IPR011124 GO:0008270
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 770 791 - -
Pvu9g1344 2017 ProSiteProfiles Post-SET domain profile. 1266 1282 IPR003616 -
Pvu9g1344 2017 Pfam SET domain 1152 1258 IPR001214 GO:0005515
Pvu9g1344 2017 SMART set_7 1141 1264 IPR001214 GO:0005515
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1742 1761 - -
Pvu9g1344 2017 ProSiteProfiles SET domain profile. 1141 1258 IPR001214 GO:0005515
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1346 1364 - -
Pvu9g1344 2017 Pfam AWS domain 1104 1138 IPR006560 GO:0005634|GO:0018024
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1406 1421 - -
Pvu9g1344 2017 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 459 1933 - -
Pvu9g1344 2017 Gene3D - 973 1034 - -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 847 915 - -
Pvu9g1344 2017 SUPERFAMILY SET domain 1069 1279 IPR046341 -
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 1344 1364 - -
Pvu9g1344 2017 Pfam CW-type Zinc Finger 981 1027 IPR011124 GO:0008270
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 468 487 - -
Pvu9g1344 2017 CDD SET_SETD2 1140 1282 IPR044437 GO:0010452|GO:0046975
Pvu9g1344 2017 ProSiteProfiles AWS domain profile. 1089 1139 IPR006560 GO:0005634|GO:0018024
Pvu9g1344 2017 MobiDBLite consensus disorder prediction 883 915 - -
Pvu9g1344 2017 PANTHER SET DOMAIN PROTEINS 459 1933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1344 Pvu-Chr9 19158508 19174046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1344 1124 1281 C2H2 Transcription Factor Family AT2G23740 32.044 6.58e-19 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu9g1344 SET 8.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1344 - - gmx:100795379 2849.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1344 9 19158508 19174046 Pvu9g1344 9 19158508 19174046 ECH