Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1325 ATGGCCACACAGAATCGTCGTTCCTCGTTCTCCTCCTCAACGACGTCGTCTTTGGCCAAGCGCCATGCATCCACCACCGCTTCCTCCTCTACCTCCTCCTCTTTAGCCGCTCCTACAAACGTGCCAAAGAAGCGTCCACCTCTCTCTAACCTCACCAACACCGTCGCTCACCGCAACTCTTCCTCTTCGGTTCCGTGCGCAGCTAAACTCGCGAAGACGAAGAAAGAGCCTGTTCCGCTCTGCTCAGGCAATAAAAGGCCTGCGTTGGCGAATGTCAAACCTACTAATGCAGTTGTTTTCCCCAAGGCTAATTCTCTCCCTGCGAGGAATCAAGCTCCTCCTCCTCCTCCTCCACTCGTTCTCACTGTTACTGTTCCTCCTCCGGTGCTGGATGCTTCACCTAGTACATCAGATGCAATGTCGGTTTCTATGGATGAGTCGATGTCTTCTTGTGACTCCTTCAAGAGTCCTGACATTGAATATGTGGACAATAGTGATATTGCGGCTGTTGATTCAATTGAGAGGAAGACGTTCAGCAATCTCAATATCTCTGATTCTGCCGAATCAGGCAACATTTGTAGTAGAGACATACTTGTTGAGTTGGAAAAAGGGGATAAGTTTGTCAATGTTGATAACAATTACGCGGATCCTCAGCTCTGCGCATCCTTTGCTTGTGATATCTACAAGCACCTTCGTGCGTCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATAAACCCCAGCATGCGTGCAATATTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACGGTAAACTACATTGACCGGTATCTTTCAGGAAATGTGATGAACAGACAAAGATTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAAGAATTTTGTTACATTACTGATAACACGTACTTCAAAGACGAGGTTTTGCAGATGGAATCTGCTGTTTTAAATTTTCTCAAGTTCGAAATGACAGCCCCAACGGTAAAATGTTTCTTAAGAAGATTTGTACGTGCAGCCCAAGGAGTCGACGAGGTCCCTTCGCTGCAACTAGAGTGCTTGACAAATTATATTGCCGAATTGTCTCTCTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTTCTGGCCAGATTTATACTTTTCCCTTCAACAAAACCATGGAATTCCACATTGCAACATTACACACTCTACCAGCCCTCTGATCTGTGTGTTTGCGTGAAGGAACTCCACCGCCTTTGTGGTAACAGCCCTAACACTAATTTGCCTGCAATCAAGGAGAAATATAGTCAGCACAAGTATAAATATGTCGCCAAGAAGTACTGCCCTCCTTCAATACCCCAAGAATTTTTCCTGAGTTGA 1467 0.454 MATQNRRSSFSSSTTSSLAKRHASTTASSSTSSSLAAPTNVPKKRPPLSNLTNTVAHRNSSSSVPCAAKLAKTKKEPVPLCSGNKRPALANVKPTNAVVFPKANSLPARNQAPPPPPPLVLTVTVPPPVLDASPSTSDAMSVSMDESMSSCDSFKSPDIEYVDNSDIAAVDSIERKTFSNLNISDSAESGNICSRDILVELEKGDKFVNVDNNYADPQLCASFACDIYKHLRASEAKKRPSTDFMERIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLARFILFPSTKPWNSTLQHYTLYQPSDLCVCVKELHRLCGNSPNTNLPAIKEKYSQHKYKYVAKKYCPPSIPQEFFLS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1325 488 MobiDBLite consensus disorder prediction 1 67 - -
Pvu9g1325 488 SMART cyclin_7 262 346 IPR013763 -
Pvu9g1325 488 SMART cyclin_7 359 447 IPR013763 -
Pvu9g1325 488 CDD CYCLIN 256 345 IPR013763 -
Pvu9g1325 488 SMART Cyclin_C_2 355 478 IPR004367 -
Pvu9g1325 488 Pfam Cyclin, N-terminal domain 226 352 IPR006671 -
Pvu9g1325 488 PANTHER CYCLINS 33 486 IPR039361 -
Pvu9g1325 488 Gene3D - 240 353 - -
Pvu9g1325 488 Gene3D - 226 474 - -
Pvu9g1325 488 PANTHER CYCLIN-A1-1 33 486 - -
Pvu9g1325 488 Pfam Cyclin, C-terminal domain 355 474 IPR004367 -
Pvu9g1325 488 CDD CYCLIN 353 446 IPR013763 -
Pvu9g1325 488 SUPERFAMILY Cyclin-like 355 480 IPR036915 -
Pvu9g1325 488 MobiDBLite consensus disorder prediction 1 68 - -
Pvu9g1325 488 ProSitePatterns Cyclins signature. 257 288 IPR006671 -
Pvu9g1325 488 SUPERFAMILY Cyclin-like 215 352 IPR036915 -
Pvu9g1325 488 PIRSF Cyclin_A_B_D_E 1 484 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1325 Pvu-Chr9 18952118 18955751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1325 4 486 Core Cell Cycle Gene Families AT1G44110 61.885 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1325 K06627 - gmx:547781 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1325 9 18952118 18955751 Pvu9g1325 9 18952118 18955751 ECH
Pvu1g0737 1 9530945 9534936 Pvu9g1325 9 18952118 18955751 PCT