Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1322 TCTGCAGCTCGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCTGGGGTTGTTCCAGAAAAAGTTGTGCAGGCAGTTCTTCAAGCTTGCAGAAGTGGTAATTTTGATCTCGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAAATGCTTACTCAGTTATTTGAAGCCATTGTTGAAGACAATGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAGTTGGGTGAAGCTGATAAGTGTCTAGTTGATGGTGCTGATGAATACTTGCAACTTCTCGATGTGGTCAGCAATACAATGCAGGCTTTTAGCAACATGCCAGAAGGATTTGCTTACGAGTGTTAG 375 0.4027 SAARLFGSSISSENLISVSGVVPEKVVQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMQAFSNMPEGFAYEC* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1322 124 PANTHER REPLICATION FACTOR C SUBUNIT 4 2 112 - -
Pvu9g1322 124 Gene3D - 22 112 - -
Pvu9g1322 124 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 2 112 - -
Pvu9g1322 124 SUPERFAMILY post-AAA+ oligomerization domain-like 22 107 IPR008921 GO:0003677|GO:0006260
Pvu9g1322 124 Pfam Replication factor C C-terminal domain 22 107 IPR013748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1322 1 120 Core DNA Replication Machinery Family AT1G21690 61.983 4.69e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1322 K10755 - pvu:PHAVU_009G1281001 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1322 9 18932969 18934150 Pvu9g1322 9 18932969 18934150 ECH