Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1309 | ATGGAGTTTGTGGATACCAGAAAACTACACTTACAACAACTGCAACAACAGCCCCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGTTTGGTTGACGACCTCCATGATTCTACTTCTTCAACCTCTTCAGAATCACCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGTTATCAGATTTGGATAAGCTTCAGTCATACTTTCTGAAATCCCTTGAAAACTCTTGCGAAAAAGAATCTGCTAACAGTATCATAGATTCCGAGAATGACAATGTCATCATTAACATCAGTAACACTAACAGTAACCATATCAATATCAATAACAATAACAGTATTAGCAAAAGGAAGGCCATATCTGCGGAGTCTCATCAAGAGAGATCAAGACCCAAAATGAAAGAGTTGGCTGTGGTGTAA | 714 | 0.4188 | MEFVDTRKLHLQQLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDSTSSTSSESPSSPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFLKSLENSCEKESANSIIDSENDNVIINISNTNSNHININNNNSISKRKAISAESHQERSRPKMKELAVV* | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1309 | 237 | ProSiteProfiles | Response regulatory domain profile. | 26 | 169 | IPR001789 | GO:0000160 | |
Pvu9g1309 | 237 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 11 | 236 | IPR045279 | GO:0009736 | |
Pvu9g1309 | 237 | Gene3D | - | 26 | 235 | - | - | |
Pvu9g1309 | 237 | SUPERFAMILY | CheY-like | 25 | 175 | IPR011006 | - | |
Pvu9g1309 | 237 | Pfam | Response regulator receiver domain | 96 | 162 | IPR001789 | GO:0000160 | |
Pvu9g1309 | 237 | SMART | REC_2 | 25 | 165 | IPR001789 | GO:0000160 | |
Pvu9g1309 | 237 | CDD | REC_typeA_ARR | 27 | 164 | - | - | |
Pvu9g1309 | 237 | MobiDBLite | consensus disorder prediction | 72 | 91 | - | - | |
Pvu9g1309 | 237 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ORR4 | 11 | 236 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1309 | Pvu-Chr9 | 18785871 | 18788693 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1309 | 22 | 235 | Response Regulator Gene Family | AT3G57040 | 45.798 | 1.20e-61 | 191 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Pvu9g1309 | Response_reg | 3.5e-13 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1309 | K14492 | - | gmx:100786187 | 337.035 |