Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1309 ATGGAGTTTGTGGATACCAGAAAACTACACTTACAACAACTGCAACAACAGCCCCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGTTTGGTTGACGACCTCCATGATTCTACTTCTTCAACCTCTTCAGAATCACCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGTTATCAGATTTGGATAAGCTTCAGTCATACTTTCTGAAATCCCTTGAAAACTCTTGCGAAAAAGAATCTGCTAACAGTATCATAGATTCCGAGAATGACAATGTCATCATTAACATCAGTAACACTAACAGTAACCATATCAATATCAATAACAATAACAGTATTAGCAAAAGGAAGGCCATATCTGCGGAGTCTCATCAAGAGAGATCAAGACCCAAAATGAAAGAGTTGGCTGTGGTGTAA 714 0.4188 MEFVDTRKLHLQQLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDSTSSTSSESPSSPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFLKSLENSCEKESANSIIDSENDNVIINISNTNSNHININNNNSISKRKAISAESHQERSRPKMKELAVV* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1309 237 ProSiteProfiles Response regulatory domain profile. 26 169 IPR001789 GO:0000160
Pvu9g1309 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 236 IPR045279 GO:0009736
Pvu9g1309 237 Gene3D - 26 235 - -
Pvu9g1309 237 SUPERFAMILY CheY-like 25 175 IPR011006 -
Pvu9g1309 237 Pfam Response regulator receiver domain 96 162 IPR001789 GO:0000160
Pvu9g1309 237 SMART REC_2 25 165 IPR001789 GO:0000160
Pvu9g1309 237 CDD REC_typeA_ARR 27 164 - -
Pvu9g1309 237 MobiDBLite consensus disorder prediction 72 91 - -
Pvu9g1309 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 11 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1309 Pvu-Chr9 18785871 18788693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1309 22 235 Response Regulator Gene Family AT3G57040 45.798 1.20e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu9g1309 Response_reg 3.5e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1309 K14492 - gmx:100786187 337.035