LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g1304	ATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAATGGCCACAAAGAGGTGGAGCAAATGGTAGCTTAAGATTTGAAATTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGAGAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCCACAGCTGTGGAGGAAGCTGGAGGCCCAAAGCTCCCTATGAAATATGGAAGAGTGGATGTATCTAAACCTGAACAATGCCCCGAAGAAGGGAGGCTTCCTGATGCTGGGCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGTAGTGGTTGGGGAAAGCCTGAGAGTAAATATACAAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATTAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTATTTGAAGACCCATCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGATTCTCCAAATCCAAAGGCAGAGAAGTTTGTAGCAGCCAAATACTCCACTGGAAAGAGAGAGCTATCTGAAGCAATGAAGCAGAAGATACGGGCTGAATATGAGGCCGTTGGTGGAAGCCCAGATAAGCCTCTACAGTCGAACTATTTTCTAAACATCATGATTATTATTGCAGTTTTGGCACTTTTGACATCACTTCTCGGAAACTAG	948	0.4335	IRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKEKYSGVTYADLFQLAGATAVEEAGGPKLPMKYGRVDVSKPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPESKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDSPNPKAEKFVAAKYSTGKRELSEAMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN*	316

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu9g1304	315	Pfam	Peroxidase	1	215	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	ProSitePatterns	Peroxidases proximal heme-ligand signature.	127	137	IPR019793	-
Pvu9g1304	315	Gene3D	-	1	236	-	-
Pvu9g1304	315	PRINTS	Haem peroxidase superfamily signature	59	76	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Haem peroxidase superfamily signature	77	89	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Haem peroxidase superfamily signature	127	142	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Haem peroxidase superfamily signature	167	182	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	MobiDBLite	consensus disorder prediction	134	166	-	-
Pvu9g1304	315	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	267	315	IPR044831	GO:0004601\|GO:0034599
Pvu9g1304	315	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	1	251	IPR044831	GO:0004601\|GO:0034599
Pvu9g1304	315	ProSiteProfiles	Plant heme peroxidase family profile.	1	284	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Plant ascorbate peroxidase signature	19	29	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Plant ascorbate peroxidase signature	33	57	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Plant ascorbate peroxidase signature	58	76	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Plant ascorbate peroxidase signature	77	89	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	PRINTS	Plant ascorbate peroxidase signature	196	220	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	CDD	ascorbate_peroxidase	1	238	-	-
Pvu9g1304	315	PANTHER	L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED	267	315	-	-
Pvu9g1304	315	PANTHER	L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED	1	251	-	-
Pvu9g1304	315	SUPERFAMILY	Heme-dependent peroxidases	1	236	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Pvu9g1304	315	Gene3D	Peroxidase, domain 2	105	228	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g1304	Pvu-Chr9	18712067	18715314	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu9g1304	1	233	Peroxidase	AT2G22420	28.352	1.53e-18	82.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g1304	K00434		-	mnt:21396537	587.03