Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1302 ATGTCGGACAAGGATTCGCAGACACAGGGGAAGGTGTTTGACGCAGAAACGGCGTCGTCGCTGGTGAAGGAGTTGAGGAAGAACTTTGGTTCGGGAAGGACGCGAAGTTATGAGTGGAGAGTGTCGCAGGTGAAGGCTCTCTTGAAAGCGATGGTTGATAACGAAGACCAAATCGTCGATGCTCTTCGTTCAGACCTAGCCAAGCCTTCACTCGAAACCCTCGTATACGAGATTGGTTTGCTTAAAAGCTCTAGTGAAGTAATACTGAAGGAATTGAAGCATTGGATGACGCCAGAAAAGGTCAAAACATCAATCAAAACTTTTCCTTCTTCAGCTGAAATAGTACCAGAACCACTGGGTGTTGTGTTAGTCATCTCTCCATGGAACTATCCAATTTTGTTGACCCTTGAACCAGTAGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGCGAAATTGATAGAGAAGTATATGGATCACTCGTTTGTAAGAGTTGTCGAGGGGGCAGTTGATGAAACAACTGCACTACTGGAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTTGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTTTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAACTTGCAGGTAGCAGCTAGACGAATAATTTCTGGCAAGTGGGGATTGAACAGTGGACAAACGTGCATTTCTCCCGATTACGTTATAACAACAAAAGACTATGCTCCTACGTTGGTGGATACCCTGAAGACTGAATTGCAGGAGTGTTACGGTAAGAATCCGTTGGAATCAGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTGAATGACGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAATAAATTAAGGATTGCTCCCACTATTCTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGAGGAGATATTCGGGCCATTGCTTCCCATCATCACGGTCAATAAACTTGAAGAAAGTCTAGATGTAATCAACTCAGGAGAGAAGCCCCTCGCTGCATATGTATTTACAACCGACGAGAAGTTCAAGGAGCTGTTCGTAAGGAATGTTTCCGCTGGAGGGTTGCTTGTCAATGATACTACCCTACATCTTTTGGTTGATACTTTGCCATTTGGGGGAGTTGGAGAGAGTGGAATGGGTGCATACCATGGCAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGCAGTTTTGCGGGTGATTCGTCGGCAAGGTACCCACCATACACAGATACAAAGCAAAGATTGATGAAAGCTCTGGTTGCTGGTACCGTCCTTGGCATAATTCGTGCTCTTTTGGGATGGTCCTAA 1473 0.4433 MSDKDSQTQGKVFDAETASSLVKELRKNFGSGRTRSYEWRVSQVKALLKAMVDNEDQIVDALRSDLAKPSLETLVYEIGLLKSSSEVILKELKHWMTPEKVKTSIKTFPSSAEIVPEPLGVVLVISPWNYPILLTLEPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIEKYMDHSFVRVVEGAVDETTALLEQKWDKIFYTGNGRVGRIVMTAAAKHLTPVLLELGGKSPVVVDSNINLQVAARRIISGKWGLNSGQTCISPDYVITTKDYAPTLVDTLKTELQECYGKNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESLDVINSGEKPLAAYVFTTDEKFKELFVRNVSAGGLLVNDTTLHLLVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSARYPPYTDTKQRLMKALVAGTVLGIIRALLGWS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1302 490 Pfam Aldehyde dehydrogenase family 13 447 IPR015590 GO:0016491
Pvu9g1302 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 223 230 IPR029510 GO:0016491
Pvu9g1302 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
Pvu9g1302 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 445 IPR016162 GO:0016491
Pvu9g1302 490 PANTHER ALDEHYDE DEHYDROGENASE 5 490 - -
Pvu9g1302 490 PIRSF ALDH 3 485 IPR012394 GO:0006081
Pvu9g1302 490 PANTHER ALDEHYDE DEHYDROGENASE 5 490 IPR012394 GO:0006081
Pvu9g1302 490 SUPERFAMILY ALDH-like 21 454 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1302 Pvu-Chr9 18694801 18699010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1302 7 490 Aldehyde Dehydrogenase Gene Family AT4G34240 61.777 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1302 K00128 - gmx:100803104 842.417