Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1297 ATGGCATCAGAGCTTCAACTGCCCCCAGGCTTCAGATTCCATCCAACTGACGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCGCCTCGCAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTTCCCGGATTGGCTTCTTACGGAGAGAAGGAGTGGTACTTCTTTTCACCGCGGGACCGGAAGTACCCGAACGGTTCGAGGCCGAACCGGGCGGCGGGAAGCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCAATTGGTCAGCCGAAAGCGGTTGGGATAAAGAAAGCGTTGGTGTTTTACGCTGGGAAAGCTCCGAAAGGGGACAAAAGCAATTGGATCATGCACGAGTATCGTCTGGCTGATGTAGATCGCTCCGTTCGCAAAAAGAACAGCCTAAGGTTGGATGATTGGGTGCTGTGCCGTATTTACAACAAGAAGGGCACGATCGAGAAATTACAACCGAGCACCGACGTAGTTGTGAGCCGGAAAATCGAATCGCCGGAGATCGAAGAGAAGAAGCCGGAGATTCTGAAAGGCGGAGGAGGTCTTCCGCCGGCGATGACGGATTACATGTACTTCGACCCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCAGGTGGTTTCGCCGGAATTCGCGAGCGAGGTGCAGAGCGAGCCAAAGTGGAACGAGTGGGAGAAGAGCCTGGAGTTTCCGTATTACATGGATACCAGTCTGAGCAACGGCTTCAGCCAATTCTCGAGCAATAACAACAACAACATTCAGATGTCGCCGCTTCAGGACATGTTCATGTACTGGCCAAAGCCCTTTTGA 864 0.5405 MASELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKAVGIKKALVFYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKLQPSTDVVVSRKIESPEIEEKKPEILKGGGGLPPAMTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKSLEFPYYMDTSLSNGFSQFSSNNNNNIQMSPLQDMFMYWPKPF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1297 287 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pvu9g1297 287 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 261 - -
Pvu9g1297 287 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pvu9g1297 287 PANTHER NAC TRANSCRIPTION FACTOR 56 2 261 - -
Pvu9g1297 287 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pvu9g1297 287 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1297 Pvu-Chr9 18658386 18660575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1297 1 287 NAC Transcription Factor Family AT1G01720 71.812 2.58e-146 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1297 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1297 - - gmx:100805768 494.197