Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1283 ATGGACGCCACTGTCATGGACTGCAGTCCTTCCTCCAATGCCGCCCCGCCCCGCCGCAGTGGTCGCCGGAAGATGGTTCAATCGACGCTCTTCCCTCTCAAGCCACCGGAGCCCGTTGAGAAGAACGACAAAGAGGACGAACGCGACGAGGATCACTCTGAGGCTGAGAATAACAAGAAGAAGAGGAAGAGGTCCAAGGCAAAAGCCACTCCTCCCAAAAAAGGTTCTTCTAAGAGCCCCGCGCCAAAGAGAAAATCAACTGCTAATGGTACTAAGGGATTGACTTCGCAGCAGGTGTTAGTTAATTCCGATCAGGTTAAGGCACCCATGTATGATTTGTTTCTAGAGGCAAAATTGTCTGCTGAGGAAGATTCGAGGATGTATGCAGGACGTCAGGTACATCCTTTTTTTTCATTATGGAAGGAGGCAAAAAAAGTTCCTGATGTGAGTGAATCAGGAAGTAATTTACCAACAGCTAAGAGCAAGCATAAAAGGGCTACTTGTGGCCCTATTCATGTATTTGAGAATGTTAAGGATGATACCTCATCTATTGACTGGAGAAACTGGACGTTTATGGGGAATACCACCTCTATGAACTATGGTCAAGAGAGTCTAAAGTCATCTGTTTTGGAGGGTTCCGTTGAATCCTTAAATTTTGATAAGCTTCACAGTTCTTTGAATCCATCGGGCGTTTCAATTTCTCAGAATGCCTTATCTTCAGATAGACTTTCTATAATTCCGAAAAAACTGGAAGAAGCATCAAGTCCAGCTTCCCTAGTAGAGAAAACATGTCTGATGTGTGAAAATGCCGAACTGGACATGGAGGTGGATGAATCTGCTCCTACAACTGTGCAAGCTGGCATTTTTAGAAAGTCTAAAGATACTGAACCACCAAGTAGATTTCTTCAAGAAAGTATGAGATCATACTACCATAGTTGTGTAGATATGGAGGAGTGCAACTTATGGACATACAAATACATGCCAAAGAAGGCTGTTGAGGTATGTGGGAATGATAAATCTGTTAATTTATTGAGTGACTGGCTACATTGTTGGCATGAAAGGCGATATAAAAGCAGGAAGGATAATGCTGACATGGATAAAAGTGACATGCAAAATGTTGAAGATGACGACGATGATTATAAATGTTCTTATAGTGACTATGATTCGGAAGATATAAATGAGAAGGATTCCCTGCAAAAAGTTCTTTTAATTACAGGGCCAGTTGGGAGTGGCAAGTCTTCAGCAGTCTATGCTTGTGCCAAAGAGCAAGGGTTTAATATTTTAGAGATCAATTCATCACATTCTAGAAATGGGACTGCTATCAGGAACTTGGAATATACTCTTACTTCACATGGGTTCAAAAGGCAATCAAGAAACACTGCAAGTTCACATAAGACCTCTATAAAATTGCCCCAAGCTCCGGCTATGCTCAGTGGTAAAGCTGCTGATGAGGCTAATGGAGTGGATGAACTGTTAACCATATCCGATGATGAAGCTCATAGCCCTAGTGGATCAACATTAAAGTTACATGGTGAAAATGATGATACTAAAAAATATAATGTCCATCCTCTAGTTCTAGTTGAGGACGTGGACATCCTTTTTGCTGAAGACCGTGGATGTATTGCTGCCATACAACAGATTGCCGAGACTTCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGTCTGCCACATAAGTTTGACATTCTCCATGTTCCATTCGTGTTGCCATCGCCAAAGGAATTGCTTTGCCATTTGTACACTGTTTGTCTCACTGAAGGAATCAACATCCATCCTCTTTTACTAGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAAACCATTATGCATCTTCAATTCTGGTTTCAGACTAAAACATTTCAAAAAGATGAAAAGGCACAAACAGGTTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATTCTACCGAAGATAATGCCCTGGGATTTTCCCTCAGTGATATCCGAACTAATTGAGATTGAAATAGCCAAACCAACAAATATAATTGAAGAAAACTCCAAAGGGTTAGTTACAAAAGATCTTCACTTAAGTGAATGGCAAAAAGATTTAAATGTGAAGTATATGGAGACTGATGATATAGAGGCCATGAAGGTGGAGATGATTAAGAGGAATGGATCGTACTATGAGCTTGAAATTCCACATAGCACTATTTCTGAGTTTTCCAATTCTTCTGGTTCCCCACTTGCATCCTCTAGGCATAATGGGCGAAGGAAACTTGTAGTTATGACCTCTGAGTCTGAGGACGAGGATTCAAATAATGGGTATCCTGTAGACTCCCATGATGAAGCTAATAACAGACAACTGATGAAAGAAAATAATCGCAGTCCATCAGAATTTCATTTAAATGGGAACTACCCCGACACATCAGTTCACAGAATAGTTTGTCCCGATTTGGAGCATTCAGAGGAGGAATATTTTAAATATTCAGAAACGGCTGATGGTACATACTTAAATGAAACATGTAAAACACTAGATGTATCATGTGTGCCAGAATCAACGTTTGTTCCTGAAACTGAAATTGAAAATGGAACAGAGACAATGTCTGGAGCCGTGTCTTCTGGTCCTGCTAACCCTCTTGTTAGGCTTCGAGAAGTATCTGTGAATAATGAGTTGAAACCATTCAATTTCAATGCTCGTAGGCGCTTAACAAAATTGTCCCAGAATCCAGATTTGTTGGCGGATACTGAAATTCCAGACCATTCTCTTGAAGGGGTTCAGCATGATGTTCAAGATGAACATACTGAAACAATTGTTAAAGTGATGGATGAGTGCAGTCGAATTGATTTCAAACTAAAGCCAACATTGTCGCAGTCCAATCCATTAGACGAGACAGAAAAGATTCAAAACGTGTGGAGAGATCTCCGTGATCGTCGAGTGGATTTAAGACAGCATTCTATCTCAGAAGAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAGTTTCAGATGCTGACTTGTTTCCAAAATGGGATATAATGGAGCCTTCAACGTTCCTTTCTAATGAAGCCGCATCAAATGGGTATTGTGGAGAAATGATGTCCACTGTGGCTGAGCATGGGTTTTGCTTTTACGCCAAGCTTATAGCAGATGAAGGATCAAAGTTGGGTTGTGCAAATTCTGTTGATATTGCCTCTGAGATGTTGGCTTCCTCCACTGATATTATGGCATTAGGGAAATTATCCCGACAGGATTTCCCGAAAATGAAAGCTTTCCATACTGGAAATGAAGTAGAGTGGAACACCCAAATAAATAATATGCAAAAGAGTGAAAAGAAAAGATCTCTGATCGAGGTCATCCAATCCATTGCTCCCGCAAGAACATCCTTGGCATTAAAAGGTTGTGCATTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCTGAAGCTTTCCGCATTTCAAAAGAGACCGAAAAGAAGAGAGGACGAAGGGTACGGGGCGTTCAGCATTACTTGAGCACATTTACCAAGTTGTCTCCAGAAGATATATCTTTGGTGACCGATGGTGATCTGTACAGAAAAAATTCTTCCCAACATACATAG 3624 0.4084 MDATVMDCSPSSNAAPPRRSGRRKMVQSTLFPLKPPEPVEKNDKEDERDEDHSEAENNKKKRKRSKAKATPPKKGSSKSPAPKRKSTANGTKGLTSQQVLVNSDQVKAPMYDLFLEAKLSAEEDSRMYAGRQVHPFFSLWKEAKKVPDVSESGSNLPTAKSKHKRATCGPIHVFENVKDDTSSIDWRNWTFMGNTTSMNYGQESLKSSVLEGSVESLNFDKLHSSLNPSGVSISQNALSSDRLSIIPKKLEEASSPASLVEKTCLMCENAELDMEVDESAPTTVQAGIFRKSKDTEPPSRFLQESMRSYYHSCVDMEECNLWTYKYMPKKAVEVCGNDKSVNLLSDWLHCWHERRYKSRKDNADMDKSDMQNVEDDDDDYKCSYSDYDSEDINEKDSLQKVLLITGPVGSGKSSAVYACAKEQGFNILEINSSHSRNGTAIRNLEYTLTSHGFKRQSRNTASSHKTSIKLPQAPAMLSGKAADEANGVDELLTISDDEAHSPSGSTLKLHGENDDTKKYNVHPLVLVEDVDILFAEDRGCIAAIQQIAETSKGPIILTSNSDNPGLPHKFDILHVPFVLPSPKELLCHLYTVCLTEGINIHPLLLEKFIHSCDGDIRKTIMHLQFWFQTKTFQKDEKAQTGYGSLPFDLELGHQILPKIMPWDFPSVISELIEIEIAKPTNIIEENSKGLVTKDLHLSEWQKDLNVKYMETDDIEAMKVEMIKRNGSYYELEIPHSTISEFSNSSGSPLASSRHNGRRKLVVMTSESEDEDSNNGYPVDSHDEANNRQLMKENNRSPSEFHLNGNYPDTSVHRIVCPDLEHSEEEYFKYSETADGTYLNETCKTLDVSCVPESTFVPETEIENGTETMSGAVSSGPANPLVRLREVSVNNELKPFNFNARRRLTKLSQNPDLLADTEIPDHSLEGVQHDVQDEHTETIVKVMDECSRIDFKLKPTLSQSNPLDETEKIQNVWRDLRDRRVDLRQHSISEELGAFQVVKLASGLCNLVSDADLFPKWDIMEPSTFLSNEAASNGYCGEMMSTVAEHGFCFYAKLIADEGSKLGCANSVDIASEMLASSTDIMALGKLSRQDFPKMKAFHTGNEVEWNTQINNMQKSEKKRSLIEVIQSIAPARTSLALKGCAFNEYLSSLRQISRSEAFRISKETEKKRGRRVRGVQHYLSTFTKLSPEDISLVTDGDLYRKNSSQHT* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1283 1207 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 74 1207 IPR004582 GO:0006281
Pvu9g1283 1207 MobiDBLite consensus disorder prediction 37 60 - -
Pvu9g1283 1207 MobiDBLite consensus disorder prediction 1 16 - -
Pvu9g1283 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 633 IPR027417 -
Pvu9g1283 1207 CDD AAA 402 468 - -
Pvu9g1283 1207 MobiDBLite consensus disorder prediction 763 784 - -
Pvu9g1283 1207 Gene3D - 320 570 IPR027417 -
Pvu9g1283 1207 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 74 1207 - -
Pvu9g1283 1207 MobiDBLite consensus disorder prediction 81 98 - -
Pvu9g1283 1207 MobiDBLite consensus disorder prediction 1 98 - -
Pvu9g1283 1207 Gene3D - 580 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1283 Pvu-Chr9 18498921 18508893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1283 322 625 Core DNA Replication Machinery Family AT5G22010 24.919 1.95e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1283 - - gmx:100784209 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1283 9 18498921 18508893 Pvu9g1283 9 18498921 18508893 ECH