Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1279 ATGGAGGACCAAAATGGTGGTGGTAAGTTAAGCCAAGGGCTTCGCAAGTTGAAGCCTTACCTTGCTATATTGTCCCTTCAGTTTGGCTACTCAGGCATGTATATCATCACTATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATCCTCTCAGTATACCGTCATGTAGTTGCTGCTATTATCATAGTCCCTTTTGCACTTGTCCTTGAGAGAAAAATAAGACCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTGGCTCTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAAATGACTTCAACATCGTTTGCATCCGCCACAGTTAATGTTCTCCCGGCCATTACTTTTGTTATGGCTCTCATTTTCGGGCTGGAGAAGGTGAACTTGAGAAAATTTCACAGCCTTGCGAAGGTCATTGGAACGGTTATAACAGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGCCGTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCAGCCACAGCAACTCTAGCAGTAGTACCACTGAACCCTCTGATCAACACTGGGCGGTTGGCACAGTCATGCTCATATCAAGTTGTGCCAGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCACTCACAGCATGGATTTGCGTAATGGGAATCATTGAGTGTTCAATCGCATCCCTTATATTTGAACGAGACTTCAGTGTATGGGTCATAGGGTGGGATTCAAGGCTTCTTGCTTGTGTGTATTCTGGAGTGATTTGTTCTGGAATGGCATACTACGTACAAGGGGTTGTAACCAGGGAACGTGGACCAGTGTTTGTAACATCTTTCAGCCCTCTATGTATGATCATCACCGCTGCATTGGGTTCCCTTGTTTTAGCCGAGCAAGTTCATCTTGGAAGCATATTAGGGGCTATTCTGATCGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTAACACGACAGATATGGGGAAAGAAGCAAGCCAAGAATTGCCAATGAAAGACACTACAAAATCAGCGTCAGACATTTTTTATGGGCTTGAGATCAATGTTCCTGGTGAGGTGTTGAAGAAAGGTGTCCCACCAACAACATCATCGTGA 1170 0.4513 MEDQNGGGKLSQGLRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTSFASATVNVLPAITFVMALIFGLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGRAFQIIKGGGAISSHSNSSSSTTEPSDQHWAVGTVMLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIECSIASLIFERDFSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSILGAILIVCGLYTVVWGKSKDRNTTDMGKEASQELPMKDTTKSASDIFYGLEINVPGEVLKKGVPPTTSS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1279 389 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020|GO:0016021
Pvu9g1279 389 Pfam EamA-like transporter family 28 152 IPR000620 GO:0016020|GO:0016021
Pvu9g1279 389 PANTHER WAT1-RELATED PROTEIN 13 363 - -
Pvu9g1279 389 PANTHER WAT1-RELATED PROTEIN 13 363 IPR030184 GO:0016021|GO:0022857
Pvu9g1279 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 339 - -
Pvu9g1279 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1279 Pvu-Chr9 18460113 18463900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1279 7 360 Nodulin-like Gene Family AT4G08300 66.667 1.30e-171 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1279 - - gmx:100783910 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1279 9 18460113 18463900 Pvu9g1279 9 18460113 18463900 ECH
Pvu9g1279 9 18460113 18463900 Pvu8g1584 8 33395834 33397343 ECH