Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1276 ATGGGTGAGGGGTTGAGAAATGCAAGGCCCTATCTGCTGTTATTGGCTGTTCAATTTGGGTCTGCTGGTATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTACGTCTTCATCGTCTACCGTAATGCCATCGCCTCCGTCACGCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAGTTAGACCGAAGATGACTTTCCGGGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCTCTATTGGGCATGAAATTCACGTCTGCTTCTTTCCTATCTGCTGTCATGAACTCTGCTCCCTCTATTACTTTTGTGATGGCAGTCATTCTAGGAATGGAGCGCATGAAAATTAAGGAGAAAGCATGTCAAGCCAAAGTGATTGGCACCGTAGTAACATTTGGAGGAACCTTGCTTATGGCATTGTACAAAGGCCCTGTCCTTAGTTTCATGAGATCTTCGACCAGCCATGCTACCCAACCTCAGAACGTGGCCAATCCTACTGGCAACCATTGGGTCATAGGCACAGTGTTCCTCCTCATTGGTTGTGCAGGCTTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCAGCAGAGATGTCGTTGGCCACTTGGGTTTGCTTTGTAGGGGCACTTCAAAGTTCTGTTGTTGCAATCTTCGCAGAACGCCACCACCCTCATGCTTGGTCCCTTGGTTGGGACACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACCTCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCCATGGGCCCAGTTATTGTGACTGCTTTTAATCCTCTGCGTATGATCATTGTTACGGGCTTGGCCTGCATCATCCTATCTGAGCAACTCTACCTTGGAAGTATAATTGGAGCAGTAGTTGTTGTTCTGGGGCTTTACCTAGTAGTGTGGGGAAAAGCTAAAGAACGTAGAGGTATGACTCCACCATCTCCGGCAGAGGGTAACTTTCCAGAAGATCAACGACAGCTACCGGTTACAGCAACAAGGAATGATAGTGATAATAATAAGGCTTAA 1095 0.4584 MGEGLRNARPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVTLAPFAFVLERKVRPKMTFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILGMERMKIKEKACQAKVIGTVVTFGGTLLMALYKGPVLSFMRSSTSHATQPQNVANPTGNHWVIGTVFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSVVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIVTGLACIILSEQLYLGSIIGAVVVVLGLYLVVWGKAKERRGMTPPSPAEGNFPEDQRQLPVTATRNDSDNNKA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1276 364 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Pvu9g1276 364 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Pvu9g1276 364 PANTHER WAT1-RELATED PROTEIN 7 354 IPR030184 GO:0016021|GO:0022857
Pvu9g1276 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Pvu9g1276 364 MobiDBLite consensus disorder prediction 330 364 - -
Pvu9g1276 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Pvu9g1276 364 MobiDBLite consensus disorder prediction 348 364 - -
Pvu9g1276 364 PANTHER WAT1-RELATED PROTEIN 7 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1276 Pvu-Chr9 18385542 18388860 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1276 3 361 Nodulin-like Gene Family AT2G37460 43.454 3.24e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1276 - - gmx:100811984 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1276 9 18385542 18388860 Pvu9g1276 9 18385542 18388860 ECH