Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1272 CCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCGGCTTCCTTCACATCTACCATTATGAATACTGTGCCCTCTATCACCTTTCTGCTTGCAGTCATCTTCCATCTAAAATTAAAGGAGGTTCGAAGTGTAGCCAAAGTGATTGGAACATTGGTAACCTTTGGAGGAGCTTTGCTAATGGCAATTTACAAAGGTCCTGCATTCAACCTTTTTCATTCTGGAAGTACAACTCATCATGAAAATGGAAGCACCTCTCACAACAACCACCAAATGGCTGGTGCTATTTATATACTAAAGGGTTGTATGCCTTTGTCGTGTTTCTACATTTTGCAG 345 0.4029 PVFNQSFTYLGMKYTSASFTSTIMNTVPSITFLLAVIFHLKLKEVRSVAKVIGTLVTFGGALLMAIYKGPAFNLFHSGSTTHHENGSTSHNNHQMAGAIYILKGCMPLSCFYILQ 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1272 115 PANTHER WAT1-RELATED PROTEIN 1 115 IPR030184 GO:0016021|GO:0022857
Pvu9g1272 115 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 68 - -
Pvu9g1272 115 Pfam EamA-like transporter family 2 65 IPR000620 GO:0016020|GO:0016021
Pvu9g1272 115 PANTHER WAT1-RELATED PROTEIN 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1272 Pvu-Chr9 18330009 18330688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1272 1 115 Nodulin-like Gene Family AT4G08290 49.180 8.87e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1272 - - pvu:PHAVU_009G1236002 234.572