Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1267 ATGGTTAAGTCAGAGCACAAGATCAAAACAGAACCATCATCAAAGGCAATGCGGTCTATATCCTCGTTATCAGCATCATCACCAGCACCAGCATCAGCATCAGATAGCAAGAAGAGGAAATACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTTTCAGAGATCAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGCTCTTATTCAACCCCAGACGCTGCTGCTAGAGCCTATGATGCTGCACTTCTATGCCTCAAAGGCTCCTCAGCTCATTTTAATTTCCCTTTAAGCTCTTCACAATATATTCCTGGAGATGCTGTCATGTCCCCCAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTCATTGACAATGCCACCATTCCCCTTTCTGCATCTCCAGCTTCAACCTCTTCGTCATCGTTGGTCTCATCCCCCTCAATGGCTTCTTCTCCTTCGGATCAAGTCGATGATGATGCCTCGCCGATGTCGTCTTTGGAAGCCTACACTAGTTGTCATCAAGCAAATGAATCAATGGCTATGAATGTGATGGAACCTTGGTACACTTTAGATGATCTTCAATCCCCCAAGTATGTTGATCAGATGTTAAGTTGTGCTTTCTTTGATGTTGATTCGTCCCTTCTGCTCGATGATCTATACGAAGAAAGCGACATCCGTTTGTGGAGCTTCTGCTGA 708 0.4492 MVKSEHKIKTEPSSKAMRSISSLSASSPAPASASDSKKRKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPDAAARAYDAALLCLKGSSAHFNFPLSSSQYIPGDAVMSPKSIQRVAAAAANSFIDNATIPLSASPASTSSSSLVSSPSMASSPSDQVDDDASPMSSLEAYTSCHQANESMAMNVMEPWYTLDDLQSPKYVDQMLSCAFFDVDSSLLLDDLYEESDIRLWSFC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1267 235 MobiDBLite consensus disorder prediction 1 40 - -
Pvu9g1267 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 235 - -
Pvu9g1267 235 MobiDBLite consensus disorder prediction 137 166 - -
Pvu9g1267 235 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 CDD AP2 40 99 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
Pvu9g1267 235 PIRSF PTI6 116 228 IPR017392 GO:0003700
Pvu9g1267 235 PIRSF PTI6 2 143 IPR017392 GO:0003700
Pvu9g1267 235 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Pvu9g1267 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 12 235 - -
Pvu9g1267 235 MobiDBLite consensus disorder prediction 14 33 - -
Pvu9g1267 235 Gene3D AP2/ERF domain 39 99 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1267 Pvu-Chr9 18302891 18303953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1267 1 234 AP2-EREBP Transcription Factor Family AT1G21910 46.000 4.80e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu9g1267 AP2 3.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1267 - - pvu:PHAVU_009G123300g 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1267 9 18302891 18303953 Pvu9g1267 9 18302891 18303953 ECH