Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1261 ATGGAAATAGACATGGACTACCACACAGATGCAATCCACAGCCTCCACTTCTCTGGATACGCCACCATCACCGACACCACCCCGTCTTCCGACGACGACTACGATTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGACCCCACGATGACTTCCACCACCTCATCGATTCCATCGTCTCCGATGGCGCAACCGCTGAGTACCTCAGCCCCGACGACCACGCCGCCAGCAACTCCCCCTCCCCCTCCATAACGGAGGAAGACGACGCCGAGGAAGAAACAGCCGCCGCCGACGATTCCAAGGGCCTGAGACTAGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGAGCCACCAAGAGTCGCGACCTTGCTCGAGTAATATTGGTTCGGCTCAAGGATCTGGTGTCCCACGCGGCGCACGGCTCCAACATGGAAAGGCTCGCCGCCTACTTCACCGACGCACTACAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACCACTACATCACGTGTGGGTCACACCACCCCCGCGATGATCATCATCAAAACGACACCCTCGCGGCGTTCCAAATGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACATTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCTTCTCTTATGCAGGCCCTTGCCTCCAACAAAGCAGGTCCACCGGGCCCACACCTCCGAATCACCGCATTGTCCCGAACCGGAACCGGACGCCGCTCCGTCGCTACCGTGCAGGAGACAGGGAGGCGATTAACGGCGTTCGCCGCTTCCCTAGGGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCGTCTTTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGTTAAACTTACCGCACCTGAGTTACCGCGCGCCCGATTCTATTGCGTCGTTTTTGAGTGGGGCGAGAGAGTTGAAGCCGAGGTTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGAGTTGCTGCATCACTATTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGCGCCAGGGCCCTTGTGGAGCGGGTTTTCTTGGGCCCGAGGATTGTAGGATCGCTGGCCCGGATCTATCGGACGGGTGAAGAGCTGCAGGAGAGGTCGTGGGGGGAGTGGTTGGGTGCGTCGGGTTTCAGGGGAGTCCCCATGAGCTTCGCCAATCATTGCCAAGCGAAGCTTCTACTCGGTCTTTTCAACGACGGTTATCGGGTAGAGGAGTTGGGGGCTAACAGACTAGTTTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCGCTTTGGACTTCTTCTTCCTCCGACTCCCATTAA 1506 0.589 MEIDMDYHTDAIHSLHFSGYATITDTTPSSDDDYDCNWNHWSPLVNWDAFTGPHDDFHHLIDSIVSDGATAEYLSPDDHAASNSPSPSITEEDDAEEETAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLKDLVSHAAHGSNMERLAAYFTDALQGLLEGAGGAHNNSKHHHYITCGSHHPRDDHHQNDTLAAFQMLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASNKAGPPGPHLRITALSRTGTGRRSVATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSIASFLSGARELKPRLVTLVEEEVGSSVGGFVGRFMELLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARIYRTGEELQERSWGEWLGASGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGANRLVLDWKSRRLLSASLWTSSSSDSH* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1261 501 MobiDBLite consensus disorder prediction 74 103 - -
Pvu9g1261 501 PANTHER SCARECROW-LIKE PROTEIN 26 16 494 IPR030028 -
Pvu9g1261 501 Pfam GRAS domain family 110 494 IPR005202 -
Pvu9g1261 501 ProSiteProfiles GRAS family profile. 101 494 IPR005202 -
Pvu9g1261 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1261 Pvu-Chr9 18210950 18212455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1261 78 499 GRAS Transcription Factor Family AT5G41920 35.880 9.59e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu9g1261 GRAS 1.6e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1261 - - gmx:100787926 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1261 9 18210950 18212455 Pvu9g1261 9 18210950 18212455 ECH