Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1260 ATGAAACCTATCATAACTCTCTCTTGCATTTTCTTTTTCTACACTACCATTTCGGCTCGCACTTTTTCAGACTATATCACTCCAAATTTCACTGCCTCATATCTTCATTTCATAGATGACTTTGGTACGTTCCTCTTCTCTCAGAACAACACATTCAAGGTTGCTATATTCAACCCCGGTGGCCAGGAAACAAGTTTCTACCTGTGTGTCATTCACGATGCGTCCAACACCATCATTTGGTCTGCTAACCGTGATGCCCCCATCTCAGCTTCGGGAAAAATGCTTCTAACTGTCAGAGGGATCACAATTCTAGACGAAGATGGGAACACCAAATGGTCAACGCCATCACTGAAATCACAAGCAGATAGACTTGTGTTGACCGAGATGGGAAATCTTGTCTTGCTTGATAAGTCCAATGGTTCTCTCTGGGAGAGTTTCCAAAGCCCAACTGACACAATTGTTATTGGGCAGCGTTTACCTGTTGGAGCATCTTTGTCAAGTGCAGCATCCAGTTCAAACTTGTCAACAGGAGATTTCAAGCTCACAATTTCTTCCTCTGATGCAGTGCTGCAATGGTATGGACAGACCTACTGGAAACTTTCATCGGATACGAAAGTCTATAAGAATTCAAATGATATGGTGGAATACATGGCCGTGAACAATTCAGGTTTTTATCTATTTGGAGATGGTGGAACATCTTTTCAACTGGGATTGCCACTGGCTAATTTTCGAATTGCCGTGTTGGGTACCACTGGGCAGTTTACTATCAACAGTTTTTCTGACACTGGCTTGACGCAGGAGTTTGTGGGGCCAGGTGATGGTTGTCAAACTCCCTTGGCTTGTGGAAGAGCAGGGTTATGCACTGAGGGCACTGTTTCCTCTACACCTGTTTGTTCTTGTCCCCCAAACTTCCGTCTAGGCTCAGGTACTTTTGGTGCTTGTGTGCTAAGCAATGGATCCTATTCCTTGCCACTTGCTTGCAAAAATTCTTCAGTTCTTTCATTTTTGAATATAGGGTATGTTGAATACTTTGCCACTTTTTACTCTGATCCGGTTATGAATAAAGGGAATTTATCTGCCTGTCAAAAATTTTGTTCCAATAACTGTTCCTGCTTGGGAATTTTATATAAAAACACATCTGGTTCTTGTTACACGATTGAGAACGAGTTGGGCTCCATTCAGTCAAGTAATGGAGATGAAAGAGACATGTTGGGGTTCATTAAAACTAATGTTGTTGAATCTAGAACTGGTAATAATGATGGTAACAAGCAAAGTTCTCAAAATGGGGGGTTTCCTGTGGCAGTTGCGGTGCTGTTACCTATTATTGGATTCATTAGTATGATGGCCATAATTTTCCTTGTGTGGAGAAGATTGATTCTCAAGTCAAAGATAAAAGAACTGAAACTAGGGAAAAACTCATCTTCCTCAAGGGACCTGGATGTTTTCTACATTCCCGGACTACCTGCAAGGTTTGACTACGAAGAGCTTGAGGAGGCTACAGAAAACTTCAAGACTCTTATTGGGTCAGGTGGGTTTGGAACTGTGTACAAGGGTGTGCTTCCCGACAAGTCTGCTGTGGCAGTAAAGAAAATAGTGAACATAGGCATCCAAGGGAAGAAAGATTTCTGCACTGAGATTGCTGTGATTGGAAACATCCACCACGTTAACTTGGTCAAACTGAAAGGCTTCTGTGCTCAAGGGAGACACCGCTTGTTGGTTTATGAGTACATGAACCGTGGATCCCTTGACCGAAACCTCTTCGGTGGTGCACCCGTTTTAGAATGGCAAGAGAGGTTTGATGTGGCGCTTGGAACAGCGCGTGGACTTGCTTACCTTCACAGTGGCTGTGAGCAAAAGATTATCCATTGTGACATCAAACCCGAGAACATACTCCTGCAAGATCAGTTTCAGGCTAAGATATCTGATTTTGGACTCTCCAAACTCCTCAGCCCCGAACAATCTGGTTTGTTCACAACAATGAGAGGCACACGTGGTTATCTTGCTCCAGAGTGGCTCACCAACTCTGCCATTACAGAAAAAACTGACGTGTATAGCTTTGGAATGGTGGTTCTTGAACTTGTGAGTGGAAGGAAGAACTGTTATTTCAGGTGGAGAAGCCATAGCATGGATGAGAGCAACAGTGGTGGAGGTCATTCCTCGACATCATCAACAACTGGGTTGGTTTATTTTCCACTATTTGCATTGGAGATGCATGAACAAAAGAGTTACCTGGAGTTGGCTGATCCAAGGCTAGAAGGACGTGTGACATATGAAGAAGTGGAGAAACTGATTCGCATTGGGTTGTGTTGCGTTCATGAAGAACCTGTACTGAGGCCAAACATGGTGAGTGTTGTTGGCATGTTGGAAGGTGAGACTCCATTGCCACAGCCGAGGATAGAATCTTTGAACTTCCTGCGCTTTTATGGGCGTAGGTTTACTGAGGCTTCCACTATAGGGGAAGAAAATGAGTATGGTTCTTTGATGCAACAAGAAGCACGTAGATCTACAAGCATACCAAGCGATTCACCCACTCATGCTTTTTCTTACATGTCTTCCCAAAATGTCTCAGGGCCAAGATAG 2580 0.436 MKPIITLSCIFFFYTTISARTFSDYITPNFTASYLHFIDDFGTFLFSQNNTFKVAIFNPGGQETSFYLCVIHDASNTIIWSANRDAPISASGKMLLTVRGITILDEDGNTKWSTPSLKSQADRLVLTEMGNLVLLDKSNGSLWESFQSPTDTIVIGQRLPVGASLSSAASSSNLSTGDFKLTISSSDAVLQWYGQTYWKLSSDTKVYKNSNDMVEYMAVNNSGFYLFGDGGTSFQLGLPLANFRIAVLGTTGQFTINSFSDTGLTQEFVGPGDGCQTPLACGRAGLCTEGTVSSTPVCSCPPNFRLGSGTFGACVLSNGSYSLPLACKNSSVLSFLNIGYVEYFATFYSDPVMNKGNLSACQKFCSNNCSCLGILYKNTSGSCYTIENELGSIQSSNGDERDMLGFIKTNVVESRTGNNDGNKQSSQNGGFPVAVAVLLPIIGFISMMAIIFLVWRRLILKSKIKELKLGKNSSSSRDLDVFYIPGLPARFDYEELEEATENFKTLIGSGGFGTVYKGVLPDKSAVAVKKIVNIGIQGKKDFCTEIAVIGNIHHVNLVKLKGFCAQGRHRLLVYEYMNRGSLDRNLFGGAPVLEWQERFDVALGTARGLAYLHSGCEQKIIHCDIKPENILLQDQFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVVLELVSGRKNCYFRWRSHSMDESNSGGGHSSTSSTTGLVYFPLFALEMHEQKSYLELADPRLEGRVTYEEVEKLIRIGLCCVHEEPVLRPNMVSVVGMLEGETPLPQPRIESLNFLRFYGRRFTEASTIGEENEYGSLMQQEARRSTSIPSDSPTHAFSYMSSQNVSGPR* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1260 859 Gene3D Transferase(Phosphotransferase) domain 1 577 794 - -
Pvu9g1260 859 SUPERFAMILY Protein kinase-like (PK-like) 477 789 IPR011009 -
Pvu9g1260 859 CDD STKc_IRAK 507 790 - -
Pvu9g1260 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pvu9g1260 859 SMART blect_4 36 149 IPR001480 -
Pvu9g1260 859 MobiDBLite consensus disorder prediction 822 859 - -
Pvu9g1260 859 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Pvu9g1260 859 Gene3D - 40 148 IPR036426 -
Pvu9g1260 859 PIRSF SRK 1 841 IPR024171 GO:0004674
Pvu9g1260 859 ProSitePatterns Protein kinases ATP-binding region signature. 507 530 IPR017441 GO:0005524
Pvu9g1260 859 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 859 - -
Pvu9g1260 859 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 9 859 - -
Pvu9g1260 859 Pfam D-mannose binding lectin 77 160 IPR001480 -
Pvu9g1260 859 CDD PAN_AP_plant 324 409 - -
Pvu9g1260 859 SMART serkin_6 501 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1260 859 Gene3D Phosphorylase Kinase; domain 1 487 576 - -
Pvu9g1260 859 ProSiteProfiles Protein kinase domain profile. 501 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1260 859 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 200 IPR036426 -
Pvu9g1260 859 Pfam Protein kinase domain 504 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1260 859 CDD B_lectin 42 149 IPR001480 -
Pvu9g1260 859 ProSiteProfiles PAN/Apple domain profile. 327 410 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1260 Pvu-Chr9 18196495 18199074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1260 458 797 Receptor kinase-like Gene Family AT5G20050 39.889 6.74e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu9g1260 Pkinase 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1260 - - gmx:100305399 1309.28