Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1249 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCGCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCCATCGGTTCAATGCAGTCCAATAGCATAAGGCCAAGGCGCACGCTGCTTCCACAACGAAAGCTGTCAAACACGCCTTCCGACCCCACTAAATCTCAAGAACAAGCTTCTTCCAAGGTCTCACTCAACACCGTCGTCCCTTCCCAAAATCTAGATGCTCAGAAGAAAGTTCAGTTTTCAGTTCACACGAATTCTACTGCTCAGGAAATGGAGTGGGTTGAAGGCAACCAAATTGAAGCATCGTCATCATTGCTTGGATGCAACCGGAAGGAGGATGTTCAGAAGGCTGGCTTCGACGCGAGTTTGAGATGTGATAGTGGAGTGAGTTCGGCGTTGCCAAAGAGAAGTGTGGTTACTCAGGATCATTTGCAGCAATTCAGTAGTTTTTTGAGTCAGCCAGCTACGCAGTCTTCGGTTTTGGGACCTTCATGTGCTACAACCACGTCAGTTCATTCAACTTCGGCACCTATGCTAAATTCAACAACACGCTATTCTCACTCGCATCTAGAAGGTGGCTCAAATGTGACTGCTGAGCCTTTTGGGGAGGTTAATGCTAACCCTCGTCCTGTTACTGAAGGGCTTGTGAAATCAGTTAATGTTTTCCAAAAGGAAACCAACAGAATGTTGGTGGATCGGGGGGCAGAAGCTGAAGTCCAAGCTTCTGGTCCTAGTATTGCTGATGCAGAGTTGGCGTCTAAGAAGAGCAATCGATCTAAGGAGCAACAAGGGAGTGTGTTGAAAGAATCTGGAGATTCTAAATATACTTGGGATGATGGTAAAGGGAAAGAGGCTGTGGATGTTGCCACTATACAACCGTTGGCTCTACCTTCCACAACCACATCTTCAGATGCGAAGTTGGAGTCTTCTAAGGTAGAAAAACGAGAGAAAATTGCAAGTAGTAAAGGTGCATCATCTGCCCGTAAAAGGACTTATGATCCTGATTTGTTTTTCAAAGTTAATGGAAAGCTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCGGACTGTAGGATATATGCCCTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATTGAGTATCTGAATAGGCTAAAGGGAAAAGATAACATCATACAGCTCATAGATTATGAGGTGACAGACAAGGCATTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTACTTGAATATGGAGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAGCCACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCATGAGGAACGTATTGTGCACTCAGACTTAAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTAATTGATTTTGGTATAGCCAAAGCAATAATGAATGACACAACCAACATCCAACGGGATTCACAGGTGGGTACACTAAGTTACATGTCTCCAGAGGCATTTATGTGTAATGAGACTGATGCAAATGGAAACATCATAAAGTGTGGCCGGTCATCAGATATCTGGTCCCTGGGCTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCAGATTACAAGACATTTTGGGCCAAATTCAAAGTGATAACAGATCCAAATCATGAAATTACGTATGAACCAGTTTCAAATCCATGGCTTTTGGATCTTATGGAGAGGTGTCTAACATGGGATCGCAATCAAAGGTGGAGAATACCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTCATCCATCATTGCCCCAGGATAATAATAGTTGTGAATTGTTACAACATATTTCTGAAACTTGTACATATGACCCAGAGGTATCTCAACTGTGTAGTCAGCTCCAACAGCTTCTTAGCGATCCAGTCGATAAAACAACTCACTCACTAAATTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGATCTATGTATTCAGCTGCATGAACGTTTGAGAAATACTGGAAGCAAGTAG 2187 0.4353 MDGKPNPDSSSADFLRHVQAALKRHRPIGSMQSNSIRPRRTLLPQRKLSNTPSDPTKSQEQASSKVSLNTVVPSQNLDAQKKVQFSVHTNSTAQEMEWVEGNQIEASSSLLGCNRKEDVQKAGFDASLRCDSGVSSALPKRSVVTQDHLQQFSSFLSQPATQSSVLGPSCATTTSVHSTSAPMLNSTTRYSHSHLEGGSNVTAEPFGEVNANPRPVTEGLVKSVNVFQKETNRMLVDRGAEAEVQASGPSIADAELASKKSNRSKEQQGSVLKESGDSKYTWDDGKGKEAVDVATIQPLALPSTTTSSDAKLESSKVEKREKIASSKGASSARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGSHQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMERCLTWDRNQRWRIPQLLQHPFLVPPVPSHPSLPQDNNSCELLQHISETCTYDPEVSQLCSQLQQLLSDPVDKTTHSLNSRDQQLKLLSQMSDLCIQLHERLRNTGSK* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1249 728 MobiDBLite consensus disorder prediction 304 331 - -
Pvu9g1249 728 PANTHER MIXED LINEAGE PROTEIN KINASE 6 700 - -
Pvu9g1249 728 MobiDBLite consensus disorder prediction 23 67 - -
Pvu9g1249 728 MobiDBLite consensus disorder prediction 258 284 - -
Pvu9g1249 728 SMART serkin_6 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1249 728 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Pvu9g1249 728 Gene3D Phosphorylase Kinase; domain 1 343 429 - -
Pvu9g1249 728 MobiDBLite consensus disorder prediction 312 331 - -
Pvu9g1249 728 CDD PKc_Mps1 348 643 - -
Pvu9g1249 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Pvu9g1249 728 ProSiteProfiles Protein kinase domain profile. 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1249 728 Gene3D Transferase(Phosphotransferase) domain 1 464 645 - -
Pvu9g1249 728 SUPERFAMILY Protein kinase-like (PK-like) 344 653 IPR011009 -
Pvu9g1249 728 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 6 700 IPR027084 GO:0004712|GO:0007093|GO:0051304
Pvu9g1249 728 MobiDBLite consensus disorder prediction 28 67 - -
Pvu9g1249 728 MobiDBLite consensus disorder prediction 254 284 - -
Pvu9g1249 728 Pfam Protein kinase domain 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1249 Pvu-Chr9 18106451 18110229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1249 356 644 MAP Kinase Kinase Kinase AT4G08470 29.333 3.47e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pvu9g1249 Pkinase 3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1249 K08866 - gmx:100780144 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1249 9 18106451 18110229 Pvu9g1249 9 18106451 18110229 ECH