Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1235 ATGCAACACTTTATTCCGGGAATTGAAGCAATGCGAAGGGCGATCTCCTTCCTCGTTCAACCGCGATGCCTCCTTTTCGTCATTGTTCTCACAATTTTCTTGATTCTCGCAATATCTGGCTCCAGACGGTTTGAAGAGAAAGAAGAAGAAGAGCCTGAAATTACAGACAGAGTATTCTTGGATGTTGATATTGATGGACAACGTTTAGGTAGGATTGTCATTGGATTATATGGCCAAGTTGTACCAAAAACTGTGGAAAATTTTAGAGCTCTGTGCACAGGGGAGAAAGGAAAGAATGCCAATGGTGTTAAACTTCACTACAAAGGAACACCATTTCATAGGATAATATCAGGTTTCATGTTTCAGGGTGGTGACATTGTCCACCGTGATGGTAGAGGATATGAATCTATTTATGGTGGTACCTTTCCTGATGAGAATTTCAAGATAAAACATTCACATGCGGGTGTAGTCTCTATGGTGAATTCAGGTCCGGATTCCAATGGCTCACAGTTTTTTATTACCACAGTGAAGACCGGTTGGTTAGATGGAGAACATGTTGTGTTTGGGAAGGTTGTCCAAGGCATGGATACTGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACAATGGGAAACCCAGAAAGAAAGTAGTCATTGCAGACTCTGGACTCTGGAGAGATACCCAAGAGTCTGTGGGATGA 699 0.4263 MQHFIPGIEAMRRAISFLVQPRCLLFVIVLTIFLILAISGSRRFEEKEEEEPEITDRVFLDVDIDGQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKNANGVKLHYKGTPFHRIISGFMFQGGDIVHRDGRGYESIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKTGWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVIADSGLWRDTQESVG* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1235 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 220 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 SUPERFAMILY Cyclophilin-like 54 226 IPR029000 -
Pvu9g1235 232 Gene3D - 43 231 IPR029000 -
Pvu9g1235 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 223 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 107 124 IPR020892 GO:0003755|GO:0006457
Pvu9g1235 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 222 - -
Pvu9g1235 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 222 - -
Pvu9g1235 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Pvu9g1235 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 198 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1235 Pvu-Chr9 17838833 17846259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1235 70 224 U-box Gene Family AT5G67530 41.026 2.66e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1235 - - vra:106760817 408.683