Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1233 ATGGTGAAGGAAATGGGTGCGAATAGGGTGTATCGTGCTCCTTCAACGTTACTTTCCTGCACATTCTTCATCATTCTCTTCACTTTACTTTCTCAAGTAACACCGCATGATCAACTTTCCAAAACCTTCATCTTCAGAATCGATTCAGAATCCAAACCCTCCGTTTATCCCACGCACTACCACTGGTACACCTCCGAGTTCGTCCACCCAACTCGCATTCTCCATCTCTATGACACCGTTTTCCACGGCTTCTCAGCGCTCCTTACCCACCAACAACTCTCTTCTCTTGCCCAGCACCCCTCCGTGCTCGCTGTCTTCGAAGACCGCCGCCGCCACCTTCACACCACGCGCTCTCCTCAGTTCGTTGGCCTCAGAAACCAGCGCGGACTCTGGTCCGAAACTGACTACGGATCCGACGTCATCATTGGAGTCTTCGACACCGGAATCTGGCCGGAGCGCCGGAGCTTCAGCGATTCCAACCTTGGCCCCATTCCTGAACGCTGGAAAGGGGGTTGCGAGGCAGGTGTAAGATTTTCTCCCAATAACTGTAACAGGAAGTTAATCGGTGCGCGGTTCTTCTCCAAAGGTCACGAGGCAAGTGGCACGTCCCTTAACGACACCGTCGAATTCCTTTCGCCAAGGGACGCTGACGGTCACGGAACCCACACGGCCTCAACAGCCGCGGGCCGCTACGTTTTCGACGCCAACATGGCGGGATATGCTTCTGGAGTTGCAAAGGGAGTGGCTCCCAAAGCGAGACTTGCCATGTACAAGGTGTGTTGGAAGAATTCTGGTTGCTTTGATTCCGACATACTCGCTGCTTTTGACGCTGCCATAAACGACGGCGTCGACGTCATTTCCATGTCCATCGGCGGCGGCGACGGCATTTCCTCTCCTTACTATCTTGACCCAATTGCGATAGGGTCCTACGGTGCAGTTTCCAGAGGCGTGTTTGTGTCATCCTCGGGTGGGAATGACGGGCCCAGTGGAATGTCGGTGACCAACCTTGCACCCTGGCTGATCACTGTCGGAGCAGGCACCATTGATCGCGATTTTCCGGCGGAGGTCATATTAGGAAACGGAAGAAGACTCTCCGGCGTGTCTCTCTACTCCGGAGTGCCGTTGAAGGGGAGAATGTTTCCCTTAATATATCCGGGAAAATCAGGGGTTCTTACGGATTCACTGTGCATGGAAAACTCGTTAGACCCAGACCTTGTGAAAGGGAAGATAGTGGTTTGCGACAGAGGAAGTAATCCGAGAGTAGCGAAGGGGTTGGAGGTGAAGAAAGCAGGAGGAGTGGGAATGATTTTGACAAACGGCATATCCAACGGTGAAGGAGTTGTTGGAGACGCTCATCTTCTTCCCACGTGTGCCCTTGGAGCTAACCTGGGAGATGAAATTAAAGAATACATTTCATCATCGGAGAACCCAAGAGCCACTATCGATTTCAAAGGAACTGTGGTGGGAATCAAACCGGCACCCGTAGTGGCGTCGTTTTCGGCTCGGGGACCCAACGCGTTGAGCTTGGAAATACTTAAACCTGATTTGACGGCGCCGGGGGTTAACATTCTGGCGGCGTGGACCGATGCGGTTGGGCCTTCGGGGCTGGAGTCCGACACCAGAAGAAGCGAGTTCAACATTTTGTCGGGCACATCGATGGCGTGTCCTCACGTGAGTGGGGCAGCGGCGTTGTTGAAATCCGCGCACCCTGATTGGAGCCCTGCAGCTATAAGGTCTGCAATGATGACAACCGCAACGGTTCTTGACAACACCAACGGCCACATGGTTGATCAAGCCACTGGGAATGGCTCAACGCCCTACGATTTCGGCGCTGGACATCTCAACCTCGCTCACGCCATCGACCCTGGATTGCTTTACGACCTTACCAACGATGATTATGTCATGTTTTTGTGTGCCATTGGCTACGAGGCCAGGATGATTCAGGTGATTACACGATCGCCGCATAATTGTCCACGGAGGAGGCCGTTGCCTGAGAATCTGAACTACCCGTCCTTTGTGGCGGTCCTGCCAGCGTCGTCCTCCAGAGGGTTGTCGTTGCTGAGCAAGACGTTCTTCAGGACTGTGACGAACGTGGGTGAGCCATATTCGGTGTATTGGGTGAGGGTGGAGATGCAAGCGGAGGGAGTAACGGTGACGGTGAGGCCGTCGAGGCTAGTGTTTTCGGAGGCGGTTAAGAAGCGGAGTTTCGTGGTGACGGTGACGGGAGTTGCAGGGAATATGGTGCTGGGTGAGGCCGGAGCGGTCTTCGGGTCGCTTTCGTGGACCGATGGGAAGCACGTGGTTCGGAGCCCCATAGTTGTTACTCAAGCTCAACCGCTTTAA 2343 0.5403 MVKEMGANRVYRAPSTLLSCTFFIILFTLLSQVTPHDQLSKTFIFRIDSESKPSVYPTHYHWYTSEFVHPTRILHLYDTVFHGFSALLTHQQLSSLAQHPSVLAVFEDRRRHLHTTRSPQFVGLRNQRGLWSETDYGSDVIIGVFDTGIWPERRSFSDSNLGPIPERWKGGCEAGVRFSPNNCNRKLIGARFFSKGHEASGTSLNDTVEFLSPRDADGHGTHTASTAAGRYVFDANMAGYASGVAKGVAPKARLAMYKVCWKNSGCFDSDILAAFDAAINDGVDVISMSIGGGDGISSPYYLDPIAIGSYGAVSRGVFVSSSGGNDGPSGMSVTNLAPWLITVGAGTIDRDFPAEVILGNGRRLSGVSLYSGVPLKGRMFPLIYPGKSGVLTDSLCMENSLDPDLVKGKIVVCDRGSNPRVAKGLEVKKAGGVGMILTNGISNGEGVVGDAHLLPTCALGANLGDEIKEYISSSENPRATIDFKGTVVGIKPAPVVASFSARGPNALSLEILKPDLTAPGVNILAAWTDAVGPSGLESDTRRSEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNTNGHMVDQATGNGSTPYDFGAGHLNLAHAIDPGLLYDLTNDDYVMFLCAIGYEARMIQVITRSPHNCPRRRPLPENLNYPSFVAVLPASSSRGLSLLSKTFFRTVTNVGEPYSVYWVRVEMQAEGVTVTVRPSRLVFSEAVKKRSFVVTVTGVAGNMVLGEAGAVFGSLSWTDGKHVVRSPIVVTQAQPL* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1233 780 CDD PA_subtilisin_like 356 481 - -
Pvu9g1233 780 Gene3D Peptidase S8/S53 domain 139 633 IPR036852 GO:0004252|GO:0006508
Pvu9g1233 780 PANTHER XYLEM SERINE PROTEINASE 1 32 774 - -
Pvu9g1233 780 SUPERFAMILY Subtilisin-like 113 624 IPR036852 GO:0004252|GO:0006508
Pvu9g1233 780 ProSiteProfiles Serine proteases, subtilase domain profile. 110 620 - -
Pvu9g1233 780 Pfam Peptidase inhibitor I9 67 114 IPR010259 -
Pvu9g1233 780 CDD Peptidases_S8_3 112 586 IPR034197 -
Pvu9g1233 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Pvu9g1233 780 Pfam PA domain 393 466 IPR003137 -
Pvu9g1233 780 Pfam Fibronectin type-III domain 666 774 IPR041469 -
Pvu9g1233 780 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Pvu9g1233 780 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Pvu9g1233 780 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Pvu9g1233 780 SUPERFAMILY PA domain 406 476 IPR046450 -
Pvu9g1233 780 Gene3D - 637 777 - -
Pvu9g1233 780 Gene3D - 349 488 - -
Pvu9g1233 780 Pfam Subtilase family 137 603 IPR000209 GO:0006508|GO:0008236
Pvu9g1233 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 114 IPR037045 -
Pvu9g1233 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 774 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1233 Pvu-Chr9 17827754 17830505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1233 17 780 Subtilisin-like Serine Gene Family AT4G34980 71.224 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1233 - - gmx:100792501 1334.7