Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1228 ATGACAAGCCACGAAGATGACCTCGATCTTCTTCTCTCCCTTCAGGACCGAGTTCCCGACACTCCTCCCGCTTCTCCCACACCAGGTTACCTTTCCGATGACGATTCGCTCAACCAAAGGGAGAAATCTGACATGTCCGTATTCAAAAACGCCGTTCAGGATTGCCTTCCCTACGATCCCCCCAAACCGCCCAAACCAACCAACAAACCTGTTACCAATGATTCCCAGCTTGAAAAGTTTTCAGGCCTTCGCATTAGGAACCAATTGTTAACTCCTGCAGAGCTCAAGGAACATTTTTCAGACATTCGATTCGTTCGGTTATCTGTTATCAAGAATTCGTTGATTGGGGATACCTTGTCTGGAAGTTGGGCCACTGTTGGTGTGTTGACTGAGAAGGGGAGTCAGAGGACGAGTTCAACAGGGAAAAACTATTGTATATGGAAAATTGGGTGTCTGGATGAGACTACCGTTTCGCTTTTCTTGTTTGGAGATGCTTATCAGAGGAATATGCAGGAACAAGCGGGAACGGTCTTTGCACTGTTTAATTGTACTGTTCGCAAGGATAATGCGGGTACTGGTTTTTCTTTGAGTATATACTCCGCCAGACAAATTATGAAGATGGGCACCTCTGTTGATTATGGAGTTTGCAAAGGGAAACGAACAGATGGGATGGCTTGTACGCTGGTCATAAATAAACGTCATGGGACATATTGTAAATATCATAAATCAAAAGCATCAGAGAATTATTCCACGATGCGAAGTGAACTCAAGGGAGGAAACTTAAAAACAGCGTTTAAGTCTAGGAATTACCTCAAATCAGAAGGAATTTACTTAGTTGACCCCCTTGCTGACAAAACAAACTTGAAGAAGTCTCGGCCAGTGAAACTATTGTCTGCGGATGGCCTCAGAAAGGCTTTGAGCAATGCAGGAAAAGTAACAACAACAACTCATTCTCAAGGCATTAGGTTTCTTTCTCAGCTTGCAGCCAAGTCGGATCCAAAAGTGAAGAATAAAGGATCAAAGATTCCAAATGAACAAAAATGTACGGAGAAGAGGAAATCATCTTTTCCGAATGTGGGATCCTCTTCAGTCATAAGAAACCGACAGTTGGATGGAAAAAGAATAAAACCAGACGGCCAGGTTTTGGCTGCTACAACTCCGAAGTATACAGAAAAGATGATTGAATTAGACTTTGTTAGCTCGGATGATGAAGACTTCTAA 1221 0.4308 MTSHEDDLDLLLSLQDRVPDTPPASPTPGYLSDDDSLNQREKSDMSVFKNAVQDCLPYDPPKPPKPTNKPVTNDSQLEKFSGLRIRNQLLTPAELKEHFSDIRFVRLSVIKNSLIGDTLSGSWATVGVLTEKGSQRTSSTGKNYCIWKIGCLDETTVSLFLFGDAYQRNMQEQAGTVFALFNCTVRKDNAGTGFSLSIYSARQIMKMGTSVDYGVCKGKRTDGMACTLVINKRHGTYCKYHKSKASENYSTMRSELKGGNLKTAFKSRNYLKSEGIYLVDPLADKTNLKKSRPVKLLSADGLRKALSNAGKVTTTTHSQGIRFLSQLAAKSDPKVKNKGSKIPNEQKCTEKRKSSFPNVGSSSVIRNRQLDGKRIKPDGQVLAATTPKYTEKMIELDFVSSDDEDF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1228 406 Pfam Primase zinc finger 208 253 IPR015408 GO:0005634|GO:0006260
Pvu9g1228 406 PANTHER PROTEIN MCM10 HOMOLOG 36 353 IPR040184 GO:0003690|GO:0003697|GO:0006270
Pvu9g1228 406 Gene3D - 68 242 IPR012340 -
Pvu9g1228 406 MobiDBLite consensus disorder prediction 1 74 - -
Pvu9g1228 406 MobiDBLite consensus disorder prediction 332 363 - -
Pvu9g1228 406 MobiDBLite consensus disorder prediction 334 352 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1228 17 404 Core DNA Replication Machinery Family AT2G20980 55.416 1.91e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1228 K10736 - gmx:100527758 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1228 9 17744775 17748140 Pvu9g1228 9 17744775 17748140 ECH