Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1212 ATGGTGAGTGGCGAACACAACCTGCCAAGTCCAACCTTGAAACAGTACAACGTTAACGTCTCCGATCAGAGCATGTCGAAGAACCACATCTCACCCACACCACATAGGTTTCGGTCCAGAAGGAGGAAAACCACTTCTGCTTGGCCCTTCTCATCGCTCAGCCTCCGCGAATACGGCATCCACAACACTAACAGTCCCTACTACAAGGGTCTCACTGATCAGTCCCTTGCCATTGTAGACGCCATACCCTCCTCCTGCACTCAACCTCAACCTCATCCTCTTCCTCATACCCCTCCCACCGACCTCCTTTCCAGTCCTTACTATAAAGGGCTTACAGACTATTCCCTTGTTATTGGCCCCTTGACCTCTCACCACCATCCCTCCTTCTCTTCCACCCCCAGTCCTTACTATGCTGGTCTTCTCACTCACTACACCCTTCTACTTCATGCACCCTCACTTGATCAACCTCCTTTCACTCACTTCCAACCTCCTATCCAAACTACTCAAGGGATAACGCCCCCTCCAAACCTCAAGACCGACTCTACTTTGAAGGACTTGATGGTCCACGCTGACCAAGTTGACTTTCTTATTCAAGAAACCAACCAATTTGGTAATTATGCATTGGAAGAACTTGGCCAGAGAGAGAATGATGTTGATGTTGATGTTGATGTTGAGATGGTGATTGAAGAGAAGGCATGGGAGAGTGTATTCGAGCATAAGTTTGAGGCTGTGTTAGAAGAAACAATGTTGGATGTGAGGTTGATGAGTGATGATGTTATTGAAGAGACACCATTGGGGGAGAAAGGTTCAGAAAGAAGGGAGGATGCAGTGGAGATGGATGTGTGGAAGGAAGAGGAAGTGAAAGTGCATGAAGAGATATCAAGAGTTTTTGTTTCATCAGAGGGAGATGTGTACGACTATACATGGGCAGCCAAACACCAACCCATGACTTTGGCAGACTTCATCTGCAACAAAGATAAAGCACATCAACTCAAAACAATGGTAAAAGATGGTTGTGGGTGCAGTCACTTTATATTTGAAGGACCACCCAGTGTGGGAAAGAGATCCATGATAAGGGCTATGCTTGGAGAGGTATTTGGAGCCGACAGGGTCCAGGTCACAGAAGAACATAAAAACTTCATTTTGAAGGGAGAAATGGTTGATAGTGTGCAAGTGCGCGTGAAGAAATCACTCCATCATGTTGAGGTGAATCTGTCAGAGACAAAGGGATACGAAAAACATGTTATTGTTGATTTATTCAAGGAAACATATGGTCAGGTGATAGATAACTCGCAGCCTTGTTTCCCAGACAATTGCAAAGCAATCGTTTTGTATGAGGCGGAGAAGCTATCCATAGAATCGTTGTTGTATATAAAGTGGCTGCTAGAGAAGTATGAAGGCTGTAATAAGGTTTTCTTCTGTTGCTCTGATGAATCCAAGCTCCAACCTGTGAAGCCACTTTGTATCACTATCCGTCTTTCATCGCCATCAACCCAAGAGCTAGCTAAGATTTTGGAAAACATTGCAAAAGAAGAAGGAATTCAGTTATCACGCCACTTACTCGATACCATAGTTTTGAGCTCCAGAAACAATCTACGCCAAGCCATTCGTTCGTTAGAGGCCACTTGCCGAAACAGGGATGTTCTGAAAGACGAGGATGTGATTCTAACAGGGTGGGAAGAAGATATTTTGGATATTGCCAAGAACATAATCCAAGAGCAAAGTCCACGACAACTGTACGCCATTCGTAGAAAGCTGCGAAGTCTTATGAGCCATGACGTTCCTCCTGACTATATTTACAAGTCTTTGGTACCAGAGTTAACCACTCTTGTTCATCACTCCCTACGCCCAGGGATTGCCAAACTCGACAGGGAGTTCATGAGACCCAGTGAAACTACGAAGCAGCACTTCTGTCATGCTCAAAACAAACAATCGGAATCTGACGACAAGAACAATGATTCAACAAAAAGGAATACCTTAACTTACTTAAAATTGGAAGAGTTTATAGCGAAAGTGATGAGCTGGTACAAGAATTGGTCTGAAAAAGACAATAAGCAGTAG 2061 0.4449 MVSGEHNLPSPTLKQYNVNVSDQSMSKNHISPTPHRFRSRRRKTTSAWPFSSLSLREYGIHNTNSPYYKGLTDQSLAIVDAIPSSCTQPQPHPLPHTPPTDLLSSPYYKGLTDYSLVIGPLTSHHHPSFSSTPSPYYAGLLTHYTLLLHAPSLDQPPFTHFQPPIQTTQGITPPPNLKTDSTLKDLMVHADQVDFLIQETNQFGNYALEELGQRENDVDVDVDVEMVIEEKAWESVFEHKFEAVLEETMLDVRLMSDDVIEETPLGEKGSERREDAVEMDVWKEEEVKVHEEISRVFVSSEGDVYDYTWAAKHQPMTLADFICNKDKAHQLKTMVKDGCGCSHFIFEGPPSVGKRSMIRAMLGEVFGADRVQVTEEHKNFILKGEMVDSVQVRVKKSLHHVEVNLSETKGYEKHVIVDLFKETYGQVIDNSQPCFPDNCKAIVLYEAEKLSIESLLYIKWLLEKYEGCNKVFFCCSDESKLQPVKPLCITIRLSSPSTQELAKILENIAKEEGIQLSRHLLDTIVLSSRNNLRQAIRSLEATCRNRDVLKDEDVILTGWEEDILDIAKNIIQEQSPRQLYAIRRKLRSLMSHDVPPDYIYKSLVPELTTLVHHSLRPGIAKLDREFMRPSETTKQHFCHAQNKQSESDDKNNDSTKRNTLTYLKLEEFIAKVMSWYKNWSEKDNKQ* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1212 686 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 55 680 - -
Pvu9g1212 686 Gene3D - 307 496 IPR027417 -
Pvu9g1212 686 Gene3D - 558 676 - -
Pvu9g1212 686 MobiDBLite consensus disorder prediction 633 655 - -
Pvu9g1212 686 CDD HLD_clamp_RFC 496 554 - -
Pvu9g1212 686 Gene3D - 497 557 - -
Pvu9g1212 686 MobiDBLite consensus disorder prediction 641 655 - -
Pvu9g1212 686 SUPERFAMILY post-AAA+ oligomerization domain-like 558 620 IPR008921 GO:0003677|GO:0006260
Pvu9g1212 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 554 IPR027417 -
Pvu9g1212 686 MobiDBLite consensus disorder prediction 24 43 - -
Pvu9g1212 686 PANTHER OS10G0574500 PROTEIN 55 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1212 Pvu-Chr9 17583621 17588370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1212 309 679 Core DNA Replication Machinery Family AT5G27740 29.787 4.52e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1212 K10756 - gmx:102664389 767.689