Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1190 ATGGACGCCTCAAAGGAAAATCGCCTGCCATCGTTTCCGCTTCTGCCCTCTTCAGATCTTCAAGGGCATCCAAGAATGGAGGAGACTCTGAAGCCCCTCCATCACCGGCTGCCTCTCCGCAGCATCAATCAGAATCTTATGCATAACAAAAGTCCTGTTCATGCCTGCAATAGCAAAGGACACACAGTTGGGCACCACCAAGCTCCTCAGCCTCATGCAACTAAGAAACAGAACCCGTTGGCCCCAAACACAAGTTACCACCTAGACTCTGAAATCATAGATATTGACGATGATGATGACGAGGATGCTAGTGACAATGCAGTTCCTGTGTTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAAATTGAAATGGAAGATGTGCAGGAACCTGTTTTAGACATCGACGCCTGCGATAGGAAAGATCCACTTGCAGTTGTTGAGTACATTGATGATATCTACATTCTCTACAAGAAAATTGAGAATTCAAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGAGCTATTCTTATTGACTGGCTTATTGAGGTGCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCCTGGAGCGTCAGTCAATGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTTTCAGTCCCTACCGTTGAGGATTTCATTCTGATAACGGACAAGGCATATACAAGAGATGAACTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTTGAGCTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAGTGTAGCATGTACCAGTTTAAGCAATGGACTAAGACTAGCGAGTGGTATACTGATTACTCAGAAGAGCAGCTTTTAGAATGCTCAAGGCTGATGGTTACTTTCCATGGGAAAGCTGGATCAGGGAAACTCACTGGTGTATATAGAAAGTACAGTACATTGAAGTATGGCTGTGCCACAAAAATAGAACCAGCTCTGTTTTTACTGGATAATTAA 1227 0.4271 MDASKENRLPSFPLLPSSDLQGHPRMEETLKPLHHRLPLRSINQNLMHNKSPVHACNSKGHTVGHHQAPQPHATKKQNPLAPNTSYHLDSEIIDIDDDDDEDASDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDRKDPLAVVEYIDDIYILYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQSMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDELLDMEKLMMNILQFNLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLLECSRLMVTFHGKAGSGKLTGVYRKYSTLKYGCATKIEPALFLLDN* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1190 408 PANTHER CYCLIN-B2-3-RELATED 64 403 - -
Pvu9g1190 408 SMART Cyclin_C_2 285 402 IPR004367 -
Pvu9g1190 408 PIRSF Cyclin_A_B_D_E 17 408 IPR039361 -
Pvu9g1190 408 Gene3D - 171 283 - -
Pvu9g1190 408 PANTHER CYCLINS 64 403 IPR039361 -
Pvu9g1190 408 SMART cyclin_7 192 276 IPR013763 -
Pvu9g1190 408 SMART cyclin_7 289 371 IPR013763 -
Pvu9g1190 408 ProSitePatterns Cyclins signature. 187 218 IPR006671 -
Pvu9g1190 408 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g1190 408 MobiDBLite consensus disorder prediction 52 84 - -
Pvu9g1190 408 CDD CYCLIN 283 370 IPR013763 -
Pvu9g1190 408 SUPERFAMILY Cyclin-like 146 282 IPR036915 -
Pvu9g1190 408 Pfam Cyclin, C-terminal domain 285 400 IPR004367 -
Pvu9g1190 408 Gene3D - 157 396 - -
Pvu9g1190 408 SUPERFAMILY Cyclin-like 284 401 IPR036915 -
Pvu9g1190 408 Pfam Cyclin, N-terminal domain 157 283 IPR006671 -
Pvu9g1190 408 CDD CYCLIN 186 275 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1190 Pvu-Chr9 17387503 17390389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1190 1 406 Core Cell Cycle Gene Families AT1G20610 54.358 3.24e-156 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1190 K21777 - gmx:100819848 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1190 9 17387503 17390389 Pvu9g1190 9 17387503 17390389 ECH