Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1178 ATGGCCAATGACGAAACTCAGCAGCGCCGTCCACGTCAACAACGCCGGTCCAAGGCTCGACCGGTGGTCCCGCCCAGGGTTCCGTTGCGGCAGTTGTTGCGGGTAGCGTCGGTTGCCGGAGGCATTCAGTTTGGGTGGGCCTTGCAGCTGTCGCTTCTGACGCCGTACGTGCAGCAGCTGGGAATTCCGCACGCGTGGGCCAGCATCATATGGCTGTGTGGGCCGCTCTCTGGGCTGCTGGTCCAGCCCCTGGTGGGCCACTTGAGCGACCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGGTGGAGCATTGTCGATCATCGTTTCTGTTCTGATCATCGGTCACGCCGCGGACATCGGGTGGTGGTTCGGCGATACGCCCAAACATCGCCCCTGGGCTGTGGGAGTTTTCGTTTTCGGGTTTTGGATTTTGGACGTGGCTAACAACGTCACTCAGGGCCCTTGTAGAGCATTGCTTGGTGATCTCACTGCCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAATATTCTTGGATATGCAGCTGGATCATACAGTAGTTGGTACAGGGTCTTTGCTTTCACTATGACCCCTGCGTGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGATATTGGTTTCATTGCTGTCACCACTTATATAAGCATCCTAGCAGCTCATGAAGTGCCTCTAAGTTCAAGTGGGGCACAACCTGTTGAAGAAGCAGCAGGGGAATCGGGTGCTGCTGGAGAAGCTTTTCTGTGGGAGCTATTTGGGACATTCAGATATTTTTCGACCCCAGTATGGACAATACTGTCTACTACTGCCTTAACATGGATTGGATGGTTTCCATTTCTCCTTTTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAACCAAATGAAGGCCCTAATTATGATACTGGAGTTAGAATGGGGGCAATTGGCTTGTTGCTTAATTCAGTTGTTCTTGGAATAACGTCTGTACTCATGGAGAGGTTATGCAGGAAGCGGGGGCCTGGGTTTGTGTGGGGAATCTCAAATATCTTGATGGCTGTCTGCTTTATTGCAATGCTTGTTGTAACCTATCTGGCTAATAAAATTGGATATATAGGCAAAGATCAACCACCAACTGGCATTGTGGTAGCTGCATTGACAATCTTTACCATTCTTGGGTTTCCACTTGCAATCACTTACAGCGTTCCATATGCCTTAATTTCCACACATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCTATGGGAGTCCTAAATCTTGCAATAGTGGTCCCACAGGTATTGCTTTTGTTTCCTTTTTAA 1374 0.4949 MANDETQQRRPRQQRRSKARPVVPPRVPLRQLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGALSIIVSVLIIGHAADIGWWFGDTPKHRPWAVGVFVFGFWILDVANNVTQGPCRALLGDLTAKDHRRTRVANAYFSLFMAIGNILGYAAGSYSSWYRVFAFTMTPACNISCANLKSAFFLDIGFIAVTTYISILAAHEVPLSSSGAQPVEEAAGESGAAGEAFLWELFGTFRYFSTPVWTILSTTALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDTGVRMGAIGLLLNSVVLGITSVLMERLCRKRGPGFVWGISNILMAVCFIAMLVVTYLANKIGYIGKDQPPTGIVVAALTIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVVPQVLLLFPF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1178 457 Gene3D MFS general substrate transporter like domains 29 455 IPR036259 -
Pvu9g1178 457 SUPERFAMILY MFS general substrate transporter 30 450 IPR036259 -
Pvu9g1178 457 MobiDBLite consensus disorder prediction 1 22 - -
Pvu9g1178 457 Pfam MFS/sugar transport protein 47 194 - -
Pvu9g1178 457 CDD MFS_SLC45_SUC 32 452 - -
Pvu9g1178 457 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 8 453 - -
Pvu9g1178 457 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 453 IPR005989 GO:0005887|GO:0008515|GO:0015770
Pvu9g1178 457 PANTHER SUGAR TRANSPORTER 8 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1178 Pvu-Chr9 17188912 17195360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1178 1 453 Sucrose Transporter Gene Family AT1G09960 69.528 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1178 K15378 - gmx:100787939 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1178 9 17188912 17195360 Pvu9g1178 9 17188912 17195360 ECH