Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1177 ATGGTGATCGAGCAAGTTCTGTGTCATTACCAGCAATTTTTGGAAGAGAAGTCGAACGTGGCCAACGGCGACGTTTTCCTTCTCTTTTCCCCGCCCTGGCTTTCCGCCTACGAGAGCTCTCTGCTCTGGATTGGGGACTACAAGCCCTCGCTCATTCTCCGTCTCGCCGACTGTGCCGTCAAGAGCTTTACGCCGGAGCAGAGGGACAAAATGGAGCGAGTCCGGGACGAGACGAAGCGAGCCGAGAGAGAGATTTCTGAGGCAATGGCCTCCGTTCAGGAGAGCATGGCGAGTCCGCGCATGCTGGCGCTCGTCAGAGAGGTTGACGGCGAGATAACGGAGCAGGAATTGGCGCTTCGGGGACTCAAGGAGGCGCTTAAGAAGGTTTCCGAGAGAGGAGACGCCCTTCGCGCGTCCACGATGAGGAAGGTGGTGGAGATTTTAAGCCCGCCGCAGACGGTGCAGTTACTGGCTGCGACGATGCGCTTTCAGATGCGCGTAAGGAAACACGGTTTACACCGAGACGAGGTTGGACCGTCAGGTTGA 546 0.5751 MVIEQVLCHYQQFLEEKSNVANGDVFLLFSPPWLSAYESSLLWIGDYKPSLILRLADCAVKSFTPEQRDKMERVRDETKRAEREISEAMASVQESMASPRMLALVREVDGEITEQELALRGLKEALKKVSERGDALRASTMRKVVEILSPPQTVQLLAATMRFQMRVRKHGLHRDEVGPSG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1177 181 Coils Coil 71 91 - -
Pvu9g1177 181 ProSiteProfiles DOG1 domain profile. 1 177 IPR025422 GO:0006351|GO:0043565
Pvu9g1177 181 Pfam Seed dormancy control 2 55 IPR025422 GO:0006351|GO:0043565
Pvu9g1177 181 PANTHER - 2 176 - -
Pvu9g1177 181 PANTHER TRANSCRIPTION FACTOR HBP-1B 2 176 - -
Pvu9g1177 181 Coils Coil 112 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1177 Pvu-Chr9 17186233 17186778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1177 1 168 Calmodulin-binding Proteins AT1G77920 27.976 1.67e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1177 - - pvu:PHAVU_009G114600g 353.984