Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1176 ATGTTCGCCGCCTTTCGCCTCCTCCTTCTTCTCTCACTCTTCTCTCTACTCAGCGCCCAACTCCACGACCAGCGTCAAATCCTTCTCAACCTAAAGTCCTCCCTACACAATTCAAAATTTTCAAAGCTCTTTGACTCATGGAATGACAACAACTCGGTTTGCAGTTTCCACGGAGTAACTTGCAACACGCTCCGTTCCGTCACCGAAATCAACCTCTCCGACCAAACTCTGACCGGGGTTCTCCCCTTCGACTCTCTCTGCAATCTTCCGTCGCTCCAGAAACTCGTGTTCGGCTTCAACGACTTGTACGGGAAGGTTTCAGAGGACATTAGAAAATGCGTCAACTTGCGCTACTTGGATTTGGGAAACAACCTTTTCTCCGGTCCCTTCCCCGACATATCTCCTCTTAATCAGTTGCAGTACTTGTTTTTAAACAAAAGTGGATTTTCGGGCACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGTTGCAGTTAAGTGTCGGAGATAACCCTTTCGATTTCACCCCGTTTCCCAAAGAGGTTGTGAGTCTCAAGAACCTGAATTGGCTCTACCTGTCCAACTGCACCCTCGGAGGGAAACTTCCGGTGGGACTCGGCAACCTCACGGAGCTCACGGAATTGGAATTCTCCGACAATTTCATCACCGGCGAACTTCCCGCGGAGATTGTGAATCTTCGGAAACTCTGGCAGTTTGTGTTTTTCAACAATACCATCACGGGGAAGATTCCAACCGGGTTTAGAAACCTCAAGGGGCTTGAGTATTTGGACGGGTCCACGAATAGACTCGAAGGGGATCTCTCAGAATTGAAGTATTTGACCAATTTGGTTTCCTTGCAATTTTTTGAGAACAATTTATCGGGGGAAATTCCGAATGAAATAGGCGAATTCAAACGCCTCCGGTCTCTGTCTCTGTACAGGAACAAATTGACAGGTCCTATTCCTCAGAAGGTTGGTTCCTGGGCCGAGTTTGAATTCATCGACGTGTCGGAGAATTTATTGACGGGGACTATTCCGCCGGAGATGTGTAAAAAGGGGAATATGAACGCACTGCTCGTGCTTCAGAACAAGCTCACCGGCGAGATTCCGGCCACCTATGGAGAGTGTTGGAGTCTGAAGCGATTAAGAGTCAGCAATAACTCGCTCTCGGGTACCGTACCTCCCGCGATTTGGGGATTGCCCAACGCCGAAATTATCGATATTGAGCTGAATCAGTTTGAAGGTTGGGTTGCTTCGGATATCGGAAACGCCAAAAAATTAACTTCAATACTCGCCAGGCAGAATCGGTTGTCCGGTGAAATACCCAAAGAAATCTCAAAAGCAACGTCGTTGCTGAGTGTGGACCTGAGCGAGAATCAGATTTCAGGGAAGATTCCAGAAGGAATCGGGGAGCTTAAAGAACTAGGTAGCCTTCATTTGCAGAGCAATAGGTTATCAGGTTCGATACCCGAATCTATCGGTTCCTGCAAATCCCTCAACGACATTGACCTATCGAGGAATTCACTCTCTGGAGAAATCCCCGCGTCGTTGGGTTCTTTCCCGGCGCTGAATTATCTGAATCTTTCAGACAACAATCTCTCAGGGGAAATTCCTAGGGGGTTATCGTTCCTCAGGTTAAGCCTCTTTGACCTATCGTACAACCGGTTAACGGGTCCAATTCCTCAGGCTCTAACCCTCGAAGCTTACAACGGAAGCCTCTCCGGAAACCCCGGTTTGTGCAGCGTCGACGCGATCAACTCCTTCCCGCGCTGCTCTTCATCCTCTGGCATGTCCAAGGACATACGTGCTCTCGTCATTTGCTTCGCGATAGCGTCGATACTATTGCTTTCGTGTTTGGGCGTTTACTTGCAGCTGAAGAGGAGGAGGGAGGAGGGAGAGAGATTCGGAGAACGTTCGTTGAAGAAAGAATCATGGGACGTGAAATCGTTCCACGTGTTAAGTTTCTCGGAGGGGGAGATTCTAGATTCCATTAGGCAGGAGAATCTGATAGGGAAAGGAGGTTCGGGGAACGTGTACAGAGTCACTCTTTCCAACGGAAAAGAACTGGCGGTGAAGCACATTTGGAACACCGATGTACCCGCCCGGAAAAAGTCGTGGAGTAGTACTTCCATGCTTGGGACTAAGCAGGGTGGGAAGTCAAAGGAGTTCGATGCAGAGGTTCAGGCTCTGAGCTCCATAAGGCACGTGAATGTGGTGAAGCTTTATTGCAGCATAACGAGTGAAGATTCGAGCTTGTTGGTGTACGAGTATTTGCCCAATGGAAGCTTGTGGGATCGGCTTCACACAAGTAGGAAGATGGAGCTCGATTGGGAAACGAGGTATGAAATCGCTGTTGGGGCAGCCAAAGGATTGGAGTATTTGCATCACGGGTGCGAACGGCCCGTGATTCACAGAGATGTCAAGTCCAGTAACATCTTGCTGGATGAGTTTTTGAAACCCAGGATTGCGGATTTCGGACTTGCTAAGGTTGTTCAAGCCAACGTTGGAAAGGATTCTTACACTGGTGTCATTGCCGGAACCCACGGTTACATTGCTCCTGAATATGGCTATACATACAAAGTGAATGAGAAGAGTGACGTGTACAGCTTTGGAGTGGTGTTGATGGAGCTAGTAACTGGAAAAAGGCCAATTGAGACAGAATTTGGGGAGAATAAGGACATGGTGAGTTGGGTCCATAACAAGGCACGGAGCATAGAGGGTCTTAGCAGTGCTGTGGATTCGAGGATCCCAGAAATGTACAAAGAGGAAGCTTGCAAGGTTTTGAGAACTGCGGTTCTGTGCACGGGAACTCTTCCAGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAGCTTGAGGATGCTGAGCCTTTTAAACTGGTAGGGATTGTTATCAGCAAAGACGGTAGTGAAAAGAAAATAGGAGTGAATGAGAAGAAATAA 2946 0.4827 MFAAFRLLLLLSLFSLLSAQLHDQRQILLNLKSSLHNSKFSKLFDSWNDNNSVCSFHGVTCNTLRSVTEINLSDQTLTGVLPFDSLCNLPSLQKLVFGFNDLYGKVSEDIRKCVNLRYLDLGNNLFSGPFPDISPLNQLQYLFLNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDFTPFPKEVVSLKNLNWLYLSNCTLGGKLPVGLGNLTELTELEFSDNFITGELPAEIVNLRKLWQFVFFNNTITGKIPTGFRNLKGLEYLDGSTNRLEGDLSELKYLTNLVSLQFFENNLSGEIPNEIGEFKRLRSLSLYRNKLTGPIPQKVGSWAEFEFIDVSENLLTGTIPPEMCKKGNMNALLVLQNKLTGEIPATYGECWSLKRLRVSNNSLSGTVPPAIWGLPNAEIIDIELNQFEGWVASDIGNAKKLTSILARQNRLSGEIPKEISKATSLLSVDLSENQISGKIPEGIGELKELGSLHLQSNRLSGSIPESIGSCKSLNDIDLSRNSLSGEIPASLGSFPALNYLNLSDNNLSGEIPRGLSFLRLSLFDLSYNRLTGPIPQALTLEAYNGSLSGNPGLCSVDAINSFPRCSSSSGMSKDIRALVICFAIASILLLSCLGVYLQLKRRREEGERFGERSLKKESWDVKSFHVLSFSEGEILDSIRQENLIGKGGSGNVYRVTLSNGKELAVKHIWNTDVPARKKSWSSTSMLGTKQGGKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKVVQANVGKDSYTGVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIETEFGENKDMVSWVHNKARSIEGLSSAVDSRIPEMYKEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPFKLVGIVISKDGSEKKIGVNEKK* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1176 981 Gene3D Ribonuclease Inhibitor 134 355 IPR032675 -
Pvu9g1176 981 Gene3D Ribonuclease Inhibitor 356 594 IPR032675 -
Pvu9g1176 981 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 965 - -
Pvu9g1176 981 SMART serkin_6 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1176 981 Gene3D Phosphorylase Kinase; domain 1 648 758 - -
Pvu9g1176 981 Gene3D Transferase(Phosphotransferase) domain 1 759 962 - -
Pvu9g1176 981 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pvu9g1176 981 Pfam Protein kinase domain 667 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1176 981 ProSiteProfiles Protein kinase domain profile. 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1176 981 SUPERFAMILY L domain-like 269 591 - -
Pvu9g1176 981 SUPERFAMILY Protein kinase-like (PK-like) 657 953 IPR011009 -
Pvu9g1176 981 SUPERFAMILY L domain-like 41 343 - -
Pvu9g1176 981 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Pvu9g1176 981 Gene3D Ribonuclease Inhibitor 22 133 IPR032675 -
Pvu9g1176 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Pvu9g1176 981 Pfam Leucine rich repeat 475 534 IPR001611 GO:0005515
Pvu9g1176 981 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 5 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1176 Pvu-Chr9 17147685 17151119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1176 1 973 Receptor kinase-like Gene Family AT1G09970 60.941 0.0 1148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu9g1176 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1176 - - gmx:100779554 1664.05