Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1175 ATGAACCATCATCCCTTCATCACCCTCTTCTCCACCATACTAATCTTTTCCACCACCACCACCCTCTCACTCTCCCAGGTTAACCAGTCACAGTTTTTCATTCTCATCAAAGACTCTCTCCCCGGGAAGTACCCCATGAATTGGGACGCTGAGAAACCCGTGTGTAGCTTCACCAGAGTTACCTGCAACACCAGAGGTGACGTTATCAAACTCGACCTTTCAGGTTGGTCATCACTTACTGGAAAGTTTCCATCGGATACATGCTCTTATCTCCCACAGTTACGTTCTCTCCACCTCGGCCACACCAGGTTCCAGTTCAACGTAGACACCATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTTCCAGACCGGCACGCTCCCAGATTTCTCTTCCTTGAAATCTCTCAGGATTCTCGACTTGTCCTACAACCTCTTCACAGGCCAGTTCCCCATGTCAGTGTTCAACCTCACCAACCTCGAGGTGCTAAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGTTACCTGCGGATATTGACAGGTTGAAAAACCTCAGGTCCGTGGTGCTAACGACGTGCATGGTGCATGGCCAAATCCCTGCGTCCTTAGGGAACATAACTTCCCTCATCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCTAAAGAGCTTGGTCAGCTGAGGAACCTTCAACAGCTTGAGCTTTATTATAACTACCATCTCGTTGGGAACATTCCAGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCAGTGAACAAGTTCACTGGGAGCATCCCCGCGTCGGTGTGTAGGCTTCCCAAGCTTCAAGTCTTGCAGCTCTACAACAACAGTCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTAAGAATGCTGTCTCTCTATGACAACTTTCTTGTAGGACAGGTTCCCAACAAACTGGGACAGTTCTCTAGAATGTTAGTTCTTGACTTGTCGGAGAACAAGTTTTCTGGTCCGTTGCCAAGCGAGGTTTGCAAGGGTGGTACGCTAGAGTACTTTCTCGTTCTGGATAACATGTTTTCTGGTGAGATACCACAGAGTTATGCTAACTGCATGATGCTGTTGAGGTTTAGAGTGAGTAACAACCGTTTGGAGGGTTCCATTCCCGCGGGACTCCTTGGTTTACCACACGTTTCAATCATTGATTTGAGTAACAATAACATGAATGGTCCAATTCCTGAGATTAACGGGAATTCTAGAAATCTTTCTGAACTGTTTCTTCAGAGGAACAAAATTTCAGGTGTCATAACTCCCACAATATCTCGAGCCATGAGCTTGGTCAAAATAGATTTCAGTTACAATCTTCTATCTGGTTCAATCCCTTCCGAAATAGGCAACCTCAGAAGACTCAATTTGCTTATGTTGCAAGGGAACAAGCTGAATTCTTCCATCCCCGGCTCACTCTCTTCCTTAGAGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTTTAACTGGGAGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCGCACAATATGCTTTCGGGTCCAATTCCTCCCAAACTGATCAAAGGAGGCTTGGTGGAAAGTTTTGCAGGGAATCCTGGGTTGTGTGTGCTACCGGTGTATGCTAATTCATCGGATCAAAACTTCCCCATATGTGCAAGTGCCTACAAGAGCAAGGGGATCAATACCATCTGGATAGCTGGGGTGTCAGGGGTTTTGATCTTTATTGGGTCTGCCCTGTTTCTCAAACGTAGGTGTAGCAAAGACACTGCTGCAGTGGAACATGAGGAGACACTCTCTTCTTCGTTCTTCTCTTATGACGTTAAGAGCTTCCACAAGATCTCTTTCGACCAAAAGGAGATCGTTGAGTCCTTGGTGGACAAGAACATAATAGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTCGCAGTGAAGAGGCTGTGGAGTCGCAAGTCCAAGGATTCAACTCCAGAGGATCGGTTGTTTGTAGATAAGGCATTGAAGGCAGAGGTGGAGACCTTAGGAAGCATAAGACACAAGAACATAGTGAAACTATACTGCTGCTTCTCCAGCTTCGACTGCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCACAAGGGTTGGATCATTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGGATTGCACAGGGTTTAGCATACCTTCACCATGATTTGCTTCTTCCTATTATCCATCGAGACATCAAGTCAACTAATATCCTGCTGGATGTTGATTACCAGCCCAGGGTTGCAGACTTTGGGATTGCCAAGGTTTTGCAAGCAAGAGGGGTGAAGGATTCCACAACAACTGTCATTGCAGGAACGTATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACTAAGTGCGACGTCTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTGGAGGCAGAGTTTGGAGAGAACAGAAATATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAGGGGGCAAGACCAAGTGAGGTGTTTGACCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTGTTGCGGGTTGCCATTCGCTGCACCTACAAAGCCCCAACAAGCAGACCAACCATGAAAGAGGTGGTTCAGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCAACAAAAGATGTATCAAATGTCACCGTAGTAAAGAAACCATATGAATTATAA 2880 0.4618 MNHHPFITLFSTILIFSTTTTLSLSQVNQSQFFILIKDSLPGKYPMNWDAEKPVCSFTRVTCNTRGDVIKLDLSGWSSLTGKFPSDTCSYLPQLRSLHLGHTRFQFNVDTILNCSHLEELNMNHMFQTGTLPDFSSLKSLRILDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFNLWQLPADIDRLKNLRSVVLTTCMVHGQIPASLGNITSLIDLELSGNFLTGQIPKELGQLRNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGQVPNKLGQFSRMLVLDLSENKFSGPLPSEVCKGGTLEYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSNNNMNGPIPEINGNSRNLSELFLQRNKISGVITPTISRAMSLVKIDFSYNLLSGSIPSEIGNLRRLNLLMLQGNKLNSSIPGSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNMLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDQNFPICASAYKSKGINTIWIAGVSGVLIFIGSALFLKRRCSKDTAAVEHEETLSSSFFSYDVKSFHKISFDQKEIVESLVDKNIIGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSFDCSLLVYEYMPNGNLWDSLHKGWIILDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPRVADFGIAKVLQARGVKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRVAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVTVVKKPYEL* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1175 959 SUPERFAMILY Protein kinase-like (PK-like) 636 929 IPR011009 -
Pvu9g1175 959 SMART serkin_6 649 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1175 959 SMART LRR_typ_2 284 308 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 500 524 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 211 235 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 161 187 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 91 114 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 332 356 IPR003591 -
Pvu9g1175 959 SMART LRR_typ_2 476 499 IPR003591 -
Pvu9g1175 959 Gene3D Phosphorylase Kinase; domain 1 632 733 - -
Pvu9g1175 959 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Pvu9g1175 959 ProSiteProfiles Protein kinase domain profile. 649 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1175 959 SUPERFAMILY RNI-like 253 571 - -
Pvu9g1175 959 SUPERFAMILY RNI-like 69 346 - -
Pvu9g1175 959 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 940 - -
Pvu9g1175 959 Gene3D Ribonuclease Inhibitor 249 571 IPR032675 -
Pvu9g1175 959 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 7 940 - -
Pvu9g1175 959 Gene3D Transferase(Phosphotransferase) domain 1 734 953 - -
Pvu9g1175 959 Gene3D Ribonuclease Inhibitor 175 248 IPR032675 -
Pvu9g1175 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Pvu9g1175 959 Pfam Protein kinase domain 651 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1175 959 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1175 Pvu-Chr9 17116903 17120956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1175 24 936 Receptor kinase-like Gene Family AT5G49660 63.913 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu9g1175 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1175 - - gmx:100785822 1683.31