Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1156 ATGGCCAACGCAACTGAGACTCAGCCTCAACAACACAAGGATTTTTCTGATGCGTCGGGTTCAGCTGCGGAGCGGAGGTGGACGCTGAATGATTTCGACATTGGAAAGCCTCTTGGAAGGGGAAAATTCGGCCACGTCTATTTGGCAAGAGAGAAGAGTAGTAATCACATTGTTGCTTTGAAAGTACTCTTTAAGGTCCAATTGCAGCAATCCCAAGTTGTGCATCAACTTCGGCGAGAAGTTGAGATACAGAGCCATCTTCGTCATCCCCACATCTTGCGCCTCTATGGATACTTTTATGATCAGAAACGAGTGTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAAGAATTGCAAAAATGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCATCATTGGCCCGGGCCCTAATATATTGCCATGGAAAACATGTAATACATAGGGACATTAAACCAGAGAACCTTCTTGTTGGTGCACAGGGTGAGTTAAAAATAGCAGACTTTGGGTGGTCAGTGCATACATTTGATCGTAGGCGCACCATGTGTGGCACACTGGATTATCTTCCTCCGGAGATGGTGGAGAGGGATGAACATGATGCGAGTGTGGATATATGGAGCCTTGGCGTGCTGTGCTATGAATTTCTTTATGGGGTGCCTCCCTTTGAGGCTAAAGAGCATTCGGATACCTACAGGAGGATAGTACATGTGGATCTCAAGTTCCCTCCTAAACCAATTGTGTCTTCTGGTGCAAAGGATCTTATCAGTCAGATGCTGATCAAGGATTCCTCACAACGGTTACCATTGCACAAACTCCTAGAACATCCATGGATTGTTCAGAATGCGGAGCCTTCTGGTGTATATAGGAGCTAG 888 0.4516 MANATETQPQQHKDFSDASGSAAERRWTLNDFDIGKPLGRGKFGHVYLAREKSSNHIVALKVLFKVQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFDRRRTMCGTLDYLPPEMVERDEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVHVDLKFPPKPIVSSGAKDLISQMLIKDSSQRLPLHKLLEHPWIVQNAEPSGVYRS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1156 295 SUPERFAMILY Protein kinase-like (PK-like) 22 287 IPR011009 -
Pvu9g1156 295 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 294 - -
Pvu9g1156 295 Pfam Protein kinase domain 34 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1156 295 PIRSF ILK 3 280 - -
Pvu9g1156 295 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 294 IPR030616 GO:0004672
Pvu9g1156 295 ProSiteProfiles Protein kinase domain profile. 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1156 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pvu9g1156 295 CDD STKc_Aurora 31 284 - -
Pvu9g1156 295 Gene3D Phosphorylase Kinase; domain 1 20 115 - -
Pvu9g1156 295 SMART serkin_6 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1156 295 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Pvu9g1156 295 Gene3D Transferase(Phosphotransferase) domain 1 116 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1156 Pvu-Chr9 16852626 16855733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1156 24 294 CBL-interacting serine-threonine protein kinases AT5G10930 34.892 1.95e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pvu9g1156 Pkinase 4.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1156 K08850 - gmx:100775451 568.54