Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1152 ATGTCCAAAATGCCCCTCTTCGTTTACTTTCATTTGTTTCTGTTATTCAGCATCTCTGTACCCTCCCGGGTAATTTCCGAAACTGAACAAACAATCCTACTCACACTCAAACGTCAACTGGGAGACCCGCCGTCGCTCCGATCATGGAAACCGTCTCCGTCGGCGCCGTGCGACTGGACGGAGATTGGCTGCGGCAGTGACGGCGCCGTCACGAAACTTCTCCTCTCCAGCAAAGGCATCACCACCTCCAAGAGCCTCCCTTCCACAATCTGCAATCTCAAAAACCTCCTCATGCTTGACCTCTCCAACAACTCCATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCAGTACCTCGACCTGTCGCAGAACTACCTAGCCGGAGCGGTCCCTGCCGACGTGGACCGCCTCAAAACCCTCACTTACCTCAGCCTCGGAGCCAACTCCTTCTCCGGAGAGATCCCGGCGGCGATCGGGAATCTGCCGGAACTGCAAACGCTGGATCTTTTCACAAACAACTTCGAGGGAACCGTCCCGAAGGAAATCGGAAACCTGTCGAACCTCGAAGGCTTGGGTTTGGCTTATAATCTCAAACTCGCGCCGTGGAAGATCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGCGTCTGTGGATGACGCGGTGCAACCTGATCGGAGAGATTCCAGAATATTTTGGGGATATTTTCACGAACCTCGTACGGTTGGATTTGTCGATGAACAAATTATCAGGGAGCATTCCGAGGACTTTGTTCTCGCTGAGGAAGTTGAGGTTCTTGTACCTGTTCAGTAACAGGTTGTCGGGTGTGATTCCTAGTGCTACGATGCAGTGTTTGGAATTAATAGACGTTGATTTGGCGAAGAATAATTTGACGGGTTCCATACCCCGAGAGTTTGGAGAGTTAAAGAACTTGAGTACCTTGCACTTGTACGAGAATCACTTGTTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTACTCTTAAGTATTTCAGGGTTTTCAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTGCAGCGATTGAGGTTTCTGATAACCAACTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCGCTTATTGGTGTTGTTGTTTCTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTCGATTGTAAATTGTCCTTCTCTCGCCACGGTTCAGGTTTATGATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAGTAATCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGGGTCAAGTGTTCTGGAATATTGCAAGGATTGAGATCGCAAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTTCAGCCAAAAATCTGGGGTTTCTTGATGCGAGAAACAACATGCTTTCGGGTGAAATTCCAAGGGAATTGACTCAACTTTCTAAGCTCACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCTTCTGAGATTATTTCGTGGCAATCACTGAACACTTTGACACTATCACGAAACAAACTTTCTGGCCAAATTCCCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAATGACATATCAGGTGAAATCCCCCCTCAGTTTGATAGGTTGAGGTTTGTTTTTCTAAACTTGTCCTCCAACCAGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAACAGTTTCTTGAACAATCCTCGTCTATGTGCTTACAATCCAAACATCCACCTTGATAACTGCTTGACCAAAACCGCATCAGCGGCACCACAGTCGAGCAATTCATCTTCGAATTCACTGGCTCTGATTCTGGCTGCCACCGCCGTTGTGTTACTGGCCATAGTTTCCTTGGTCTTCTATACGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAGGCTTGATCTCAAGGAAATAAATTTCCTCTCAAGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGAAGATCTGGAATCGCGAGGATGTGGATGACACGTTGGAGAAAGAGTTCCAGGCCGAGGTTGAGATCCTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGAAGAAATCGCCTACTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGTCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCGGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAAATGTTATCAAAGCCCGGTGAACTAAACACCATGTCTGCTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAGAAAGTTGATGTTTATAGCTTTGGCGTTGTGCTCTTAGAGCTTGTGACAGGAAGGAAACCTAATATGAGAGGCGAGCATGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTACTGAAGCGAAGAGCCTTACTGATGCATTCGATGAGGATATCAAAGAACCACGTTATGCGGAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCTCCTTGCCCTCAACTAGACCTTCCGCAAAGGAGATTATGCAAGTTCTTCGTCGGTGTTGTCATTCAGGTTCTACACGCAGAAGAGTGGGAAATGAGTTTGATATCGCTCCTCTACTTAGTGACCCAAGGTACGTTTGTAGTTACAAGGAGAGTAATGCTGCAACCAATAACTCATCCTGGTGA 3057 0.4684 MSKMPLFVYFHLFLLFSISVPSRVISETEQTILLTLKRQLGDPPSLRSWKPSPSAPCDWTEIGCGSDGAVTKLLLSSKGITTSKSLPSTICNLKNLLMLDLSNNSIAGEFPTTLYECSNLQYLDLSQNYLAGAVPADVDRLKTLTYLSLGANSFSGEIPAAIGNLPELQTLDLFTNNFEGTVPKEIGNLSNLEGLGLAYNLKLAPWKIPLEFRKLRNLRRLWMTRCNLIGEIPEYFGDIFTNLVRLDLSMNKLSGSIPRTLFSLRKLRFLYLFSNRLSGVIPSATMQCLELIDVDLAKNNLTGSIPREFGELKNLSTLHLYENHLFGEIPVSLSQIPTLKYFRVFSNNLSGTLPPELGLHSKLAAIEVSDNQLSGGLPEHLCAGGALIGVVVSSNNFSGVLPESIVNCPSLATVQVYDNKFSGEVPLGLWTMSNLSSLILSNNSFSGPLPGQVFWNIARIEIANNNFSGGISVGITSAKNLGFLDARNNMLSGEIPRELTQLSKLTALMLDGNQLSGALPSEIISWQSLNTLTLSRNKLSGQIPTAITALPRLAYLDLSQNDISGEIPPQFDRLRFVFLNLSSNQLSGKIPDEFNNLAFENSFLNNPRLCAYNPNIHLDNCLTKTASAAPQSSNSSSNSLALILAATAVVLLAIVSLVFYTLKTQWGKKHCGHKNKVATWRLTSFQRLDLKEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNREDVDDTLEKEFQAEVEILGNIRHSNIVKLLCCYASENSKLLVYEYMENQSLDKWLHAEKKSPTGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLSKPGELNTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNMRGEHACSLVEWAWEHFTEAKSLTDAFDEDIKEPRYAEEMANVFKLGLLCTSSLPSTRPSAKEIMQVLRRCCHSGSTRRRVGNEFDIAPLLSDPRYVCSYKESNAATNNSSW* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1152 1018 Gene3D Ribonuclease Inhibitor 388 628 IPR032675 -
Pvu9g1152 1018 SUPERFAMILY L domain-like 35 375 - -
Pvu9g1152 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Pvu9g1152 1018 Gene3D Ribonuclease Inhibitor 289 387 IPR032675 -
Pvu9g1152 1018 SUPERFAMILY L domain-like 375 597 - -
Pvu9g1152 1018 SMART LRR_typ_2 312 336 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 432 456 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 550 573 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 93 117 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 502 526 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 240 264 IPR003591 -
Pvu9g1152 1018 SMART LRR_typ_2 165 189 IPR003591 -
Pvu9g1152 1018 SMART serkin_6 699 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1152 1018 Gene3D Phosphorylase Kinase; domain 1 680 778 - -
Pvu9g1152 1018 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 991 - -
Pvu9g1152 1018 SUPERFAMILY Protein kinase-like (PK-like) 694 974 IPR011009 -
Pvu9g1152 1018 ProSiteProfiles Protein kinase domain profile. 699 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1152 1018 Pfam Protein kinase domain 701 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1152 1018 Gene3D Transferase(Phosphotransferase) domain 1 779 991 - -
Pvu9g1152 1018 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Pvu9g1152 1018 Gene3D Ribonuclease Inhibitor 181 288 IPR032675 -
Pvu9g1152 1018 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 14 991 - -
Pvu9g1152 1018 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
Pvu9g1152 1018 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Pvu9g1152 1018 Pfam Leucine rich repeat 87 130 IPR001611 GO:0005515
Pvu9g1152 1018 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Pvu9g1152 1018 CDD STKc_IRAK 705 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1152 Pvu-Chr9 16812824 16816416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1152 19 997 Receptor kinase-like Gene Family AT5G25930 53.043 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu9g1152 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1152 K00924 - gmx:100782466 1559.66