Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1141 ATGCCTGAGCTGCGTACCCGAACACGCAGAAGCCGACTCGTAGACAACGCAAACGCGAACCCAATCATTCAGCCAACCTCGCCGGCGGCCGCCAGAGCTCGAAGGAGGAAGACATCCGCCGCGGCTGCCCTAAGCCGGAGGAATCGGAGAGAGAACAACGCGATCGCTGCCGCCAATGAAATCGTGAACGATTACGCCGGTGTTGTTCGCGAAGCCAGAAATAGAAATATAAATTTGGAAGACGAGTTAGGAGAGAAAGAGAATAACAATATTAAGGTTTCGGTTAGGGTTTTTGAAGAGGAAGACATGGATGAAGACGATAGCCGTGGCCGCAGCGCAGATAAGGCTCCCGGAGCTGAAGATGAAGGTGGCACTGCTCCTCTTCCGGAGAAGGTTCAAGTTGGTGGTTCTCCGTTGTATAGAATTGAGAGAAAACTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGTCGGCGGATGGGAGTTGTGAATTCTGGCGAACGGACTGGTGCTGGTGCTGTTGAGATAGCCTTAAAATTCGAGCATAGAAGCAGCAAGGGGTGCAATTATGGACCACCATATGAGTGGCAGGTTTACAATGTATTAGGCGGTAGTCATGGTGTACCACGAGTGCATTTCAAGGGACGACAAGGTGACTACTATATTATGGTCATGGATATGCTTGGCCCCAGTCTGTGGGATGTTTGGAATAACAACTCACACACCATGTCTACTGAAATGGTTGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTAAAGCCTGAGAATTTTTTGCTTGGACCCCCAGGAACTCCAGATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTAGGTGGCGTGATAGTTCGACTGGCCTTCATGTTGAATATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTAGAATCTCTTGCTTACACTCTTGTCTTCCTTCTTCGTGGTCGGCTTCCCTGGCAAGGATATCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAAAAAAAGATGGCCACCTCTCCAGAAACTTTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTTGATGGAATTGTGGGCCCAAATCCAGATATCAGACCAATAAACACCGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATGGAAGAGGATGATGATGAACAACCAAAAAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGTTAGCCCAACACATTGATAAAGGGAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTACTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCCTCCTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAATAATTATTACATTAGTGCCATAGCGGGAGCTCATAATGGAAGTTCATTGGTTGTAATGTCTAAAGGTACACAGTACGTACAGCAATCCTATAAAGTCAGTGATTCATTTCCGTTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCACGTGGAGCTGGTTATTCTGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAATGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAGGCTGCTCTTGTTCTTAGTGTTCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTACGCACATCTGCTTTTCCTAGTGCTCATATTAAGGATAAATGGGCAAAGAATCTCTATATTGCATCTATTTGTTATGGGAGAACAGTGTCATAA 2124 0.4459 MPELRTRTRRSRLVDNANANPIIQPTSPAAARARRRKTSAAAALSRRNRRENNAIAAANEIVNDYAGVVREARNRNINLEDELGEKENNNIKVSVRVFEEEDMDEDDSRGRSADKAPGAEDEGGTAPLPEKVQVGGSPLYRIERKLGKGGFGQVYVGRRMGVVNSGERTGAGAVEIALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHFKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCTNLWALIMDAGTGFTAQVYELSSYFLHKEWIMEQWENNYYISAIAGAHNGSSLVVMSKGTQYVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGTRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAALVLSVPRRKPADETQETLRTSAFPSAHIKDKWAKNLYIASICYGRTVS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1141 707 MobiDBLite consensus disorder prediction 96 134 - -
Pvu9g1141 707 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1141 707 SMART serkin_6 140 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1141 707 SUPERFAMILY Protein kinase-like (PK-like) 140 420 IPR011009 -
Pvu9g1141 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Pvu9g1141 707 PANTHER CASEIN KINASE-RELATED 87 681 - -
Pvu9g1141 707 Gene3D Transferase(Phosphotransferase) domain 1 114 463 - -
Pvu9g1141 707 ProSiteProfiles Protein kinase domain profile. 140 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1141 707 PANTHER - 87 681 - -
Pvu9g1141 707 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Pvu9g1141 707 Coils Coil 62 89 - -
Pvu9g1141 707 CDD STKc_CK1 140 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1141 Pvu-Chr9 16704229 16709140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1141 235 416 MAP Kinase Kinase Kinase AT5G50180 25.000 1.52e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pvu9g1141 Pkinase 4.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1141 - - gmx:100779382 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1141 9 16704229 16709140 Pvu9g1141 9 16704229 16709140 ECH
Pvu9g1141 9 16704229 16709140 Pvu1g0792 1 11149590 11156145 PCT