Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1134 ATGGCCAAAGGATCTTCAAAGACAAAATCCATTACATTTATATGCCTCTTCTTGTTCATGCTCTACTTCCATTCATCCCACGGAGATCCACAAGAGGTTGAGCTTTTATTATCCTTCAAAGCTTCCATCGATGACCCGCTTCACTTTCTCTCCAACTGGGAAACTTCCTCTGCCAATATATGCAGGTGGCATGGCATCACCTGCGACAACAACGTTAACTCTTCCCACGTTAACGCTGTGGTGCTCTCGGGAAAAAACATGACTGGCGAGGTTTCCTGTATTTTTCAACTTCCATACGTCACAAAACTCGACCTTTCCAATAACCAGTTTGTTGGGGAAATTACTTTTAACTACTCTCTCAATGATCTGTCTCTACTTCGTTACCTTAACCTCAGCAGCAACAACCTCACAGGTTCTTTGCCTCAACCCTTGTTTTCCGTGCTTTTCTCAAACCTTGAAACTCTGGATCTCTCCAACAACATGTTTTCGGGGAACATACCTGACCAAATTGGATTGCTTTCCAGCCTAAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCACCAACATGACCACTTTGCAATACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCACAAGAAATTGGCCAAATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAATAACCTTTCAGGTGAGATACCAAGTAGCATTGGAGAGTTACTCTCTTTGAATCATCTCGACCTTGTTTACAACAACCTCACTGGACCTATTCCTCATTCTCTCGGACACCTCACCGAGCTTCAATATCTCTTTCTCTATCAAAACAAACTGAGTGGTCCAATTCCCCAATCCATTTTCGAACTCAAAAAGCTCCTTTCACTCGATCTAAGTGATAACTCTCTTTCGGGTTTGATTTCTGAGCGTGTGGTTCAGCTCCAGAGACTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAAGATTCCAAAGGGTGTTGCATCTTTGCCTCGGCTCCAGGTTCTTCAGCTATGGTCAAATGGATTAACAGGTGAGATTCCTGAAGAGCTAGGAAAACATAGCAACCTCACTGTGTTAGACCTCTCCACCAACAACCTCGCAGGGAAGATTCCAGATAACATATGCCACTCAGGTACTCTTTTCAAGCTGATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTTAGACTCCAAGACAACAAGTTCTCGGGGAAATTACCATCGGAGTTAACCACACTGCCTCAGGTATACTTCTTGGATATCTCTGGAAACCAACTTTCAGGAAGGATCGATGACCGAAAATGGGACATGCCGTCGCTTCAAATGCTCAGTTTGGCCAACAACAACTTCTCAGGAGAAATCCCTAGCTCTTTCGGGACACAAATTATCGAGGACTTGGACTTATCAAACAACCAATTCTCAGGTTCTATTCCACTAGGTTATAAAAGCCTGTCAGAGCTGGTGGAATTGAAGCTCAGCTATAACAAACTCTTTGGTAACATCCCAGAAGAAATTTGCTCGTGCAAGAAGCTCGTGGCCTTATATTTGAATCACAACCAGCTCAATGGTGAAATTCCGATGAAATTCTCCGAGATGCCGGTTCTGGGCCTTCTTGACCTGTCAGAAAACCAACTCTCCGGCGAGATTCCACAGGATTTGGGAAGCACCGAGTCTCTCGTTCAGATCAACATTTCGCACAATCATTTTCGTGGAAGTTTACCTTCTACCGAGGCTTTCCTCGCCATCAACGCTAGTGCAGTCACCGGCAACAACCTTTGTGACCGTGATGGTGACTCTTCAAGCGGGTTGCCACTGTGTAAAAGCAACAACCAGAACCCAACTTGGCTCCTCATCATGCTGTGTTTTCTACTAGCATTGGTTGCGTTCGCAGCAGCTTCTTTACTCGTCTTTTATATTCATAAGAGAAAGAGCTTCTCGGAAGTGCGAAAAGTGGAAAACGAAGACGGAACCTGGGAAGTGCAGTTTTTTTATTCCAAAGCAGCGAGGTTGATGAAGGTAGATCATGTTTTGTCTGCGGTTAAAGAGGGAACAGTTGTCTCCAAAGGAAGGAACTGGGTTTCCTACGAGGGGAAGTGCATGGAGAATGACATGCAGTTCATGGTGATAGAAATCAGTGACTTGAATTCTCTTTCGATGAGTACGTGGGAAGAGACAGTGAAAGTTGGAAAGGTTCATCACCCCAATATCTTCAATCTTATTGGGACGTGTAGGTGTGGGAAGAAAGGGTACTTGGTGTACGAACACGAGGAGGGTAAGAAACTAAGCCAAATTGTGAACAGTCTGAATTGGAAACAACGATGCAAAATTGCTGTTGGCGTTGCAAAAGCGATTAAATTCCTTCATTCTCGAGCTTCATCCATTGTTTTGGTGGGAGAGGTTGCACGGGAGATAGTTAGTATCGACAGCAAAGGTGTCCCTCGCCTTAAGGTCACTCCTCCCATACTGACATGCTTGGATGTCAAGGGCATCACTTCTTCACCCTACCTTGCCCAAGAGGCAAGAGAGAGGAAAAATGTGACAGAGAAGAGTGAGATATATGGGGTGGGAGTTATGCTGATTGAACTATTGACGGGAAGGAACGCCATAGACATAGAAACAGGCAATGGCATGCACAAGAGTATTGTGGAGTGGGCCCGTTATTGTTACTCTGACTGTCATCTTGACACGTGGATCGATCCTGTGATGAAAGGTGGAGATGCATCGAGCTATCAGAACGACATGGTTGAGATGATGAATCTGGCACTGCAATGTACCACAACTGATCCCACTGCAAGGCCATGCGCTAGAGATGTACTCAAAGCCCTAGAGAGTTTTCACAGAACTACTTTTTGCTGA 2928 0.4481 MAKGSSKTKSITFICLFLFMLYFHSSHGDPQEVELLLSFKASIDDPLHFLSNWETSSANICRWHGITCDNNVNSSHVNAVVLSGKNMTGEVSCIFQLPYVTKLDLSNNQFVGEITFNYSLNDLSLLRYLNLSSNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIGLLSSLRYLDLGGNVLVGKIPNSITNMTTLQYLTLASNQLVDKIPQEIGQMKSLKWIYLGYNNLSGEIPSSIGELLSLNHLDLVYNNLTGPIPHSLGHLTELQYLFLYQNKLSGPIPQSIFELKKLLSLDLSDNSLSGLISERVVQLQRLEILHLFSNNFTGKIPKGVASLPRLQVLQLWSNGLTGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICHSGTLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQDNKFSGKLPSELTTLPQVYFLDISGNQLSGRIDDRKWDMPSLQMLSLANNNFSGEIPSSFGTQIIEDLDLSNNQFSGSIPLGYKSLSELVELKLSYNKLFGNIPEEICSCKKLVALYLNHNQLNGEIPMKFSEMPVLGLLDLSENQLSGEIPQDLGSTESLVQINISHNHFRGSLPSTEAFLAINASAVTGNNLCDRDGDSSSGLPLCKSNNQNPTWLLIMLCFLLALVAFAAASLLVFYIHKRKSFSEVRKVENEDGTWEVQFFYSKAARLMKVDHVLSAVKEGTVVSKGRNWVSYEGKCMENDMQFMVIEISDLNSLSMSTWEETVKVGKVHHPNIFNLIGTCRCGKKGYLVYEHEEGKKLSQIVNSLNWKQRCKIAVGVAKAIKFLHSRASSIVLVGEVAREIVSIDSKGVPRLKVTPPILTCLDVKGITSSPYLAQEARERKNVTEKSEIYGVGVMLIELLTGRNAIDIETGNGMHKSIVEWARYCYSDCHLDTWIDPVMKGGDASSYQNDMVEMMNLALQCTTTDPTARPCARDVLKALESFHRTTFC* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1134 975 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pvu9g1134 975 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Pvu9g1134 975 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Pvu9g1134 975 Gene3D Phosphorylase Kinase; domain 1 676 779 - -
Pvu9g1134 975 ProSiteProfiles Protein kinase domain profile. 658 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1134 975 SMART serkin_6 704 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1134 975 Gene3D Transferase(Phosphotransferase) domain 1 781 973 - -
Pvu9g1134 975 SMART LRR_typ_2 508 532 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 123 147 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 556 580 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 341 365 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 461 485 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 197 221 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 269 293 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 149 173 IPR003591 -
Pvu9g1134 975 SMART LRR_typ_2 366 389 IPR003591 -
Pvu9g1134 975 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Pvu9g1134 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 973 - -
Pvu9g1134 975 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Pvu9g1134 975 SUPERFAMILY L domain-like 316 598 - -
Pvu9g1134 975 Gene3D Ribonuclease Inhibitor 293 624 IPR032675 -
Pvu9g1134 975 PANTHER - 7 973 - -
Pvu9g1134 975 Pfam Protein tyrosine and serine/threonine kinase 743 965 IPR001245 GO:0004672|GO:0006468
Pvu9g1134 975 SUPERFAMILY L domain-like 29 331 - -
Pvu9g1134 975 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Pvu9g1134 975 PRINTS Leucine-rich repeat signature 296 309 - -
Pvu9g1134 975 PRINTS Leucine-rich repeat signature 508 521 - -
Pvu9g1134 975 SUPERFAMILY Protein kinase-like (PK-like) 710 970 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1134 Pvu-Chr9 16615898 16620071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1134 13 967 Receptor kinase-like Gene Family AT2G25790 51.189 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Pvu9g1134 PK_Tyr_Ser-Thr 1.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1134 - - gmx:100777118 1615.51