Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1112 ATGGAGAGGGTCATCGGCGGCAAGTTTAAGACTGGTCGGAAAATCGGAAGCGGTTCTTTTGGAGAAATTTATATTGCCTCAAATATGGACACCTCGGAAATTGTTGCCATCAAGATGGAAAACAAGAAGACCAAACATCCACAGCTATTGTATGAGGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTGTTCCAAGTATGAAGTGGTGCGGTACTGATGGAGACAATAATGTTCTAGTCATTGATCTTCTGGGACGGAGTCTTGAAGACTTTTTTGTCTATTGCGGGAGGAACTTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACAAGAATAGAGTACCTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAATTTTCTTATGGGTCTCGGGAGGAAATCAAATCAGGTTTATATTATTGATTTCGGACTGGCAAAAAGATATAGGGATCCAAACACAAATAAGCATATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCACGTTATGCAAGTTGCAACACTCACATGGGAATTGAACAAAGTCGCCGAGATGATCTGGAGTCTCTTGGCTATGTTCTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCCACCAAGAAGGAAAAATATGACAATATTTGTGACAAGAAGTTATCGACTCCCATTGAGATGCTCTGCAAATCATATCCTGTGGAGTTTGCTACATACTTTCATTATTGCCAATCTTTGACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCCTGTTTCGTGATTTGTTCAAACGAGAAGGATACGATTCCGACTATATATATGACTGGACCATCCTAAAATATCAGAAGTTGCAACAGACAAAGAAACAAAATCAATCATCTCCTTCAGCTGCATTGCCTAGCAATCTAGAATCAGCAGTTGTGGAAAAGCATAAAGGAGCCAATGATTCAACTCATGTTAATGTAACAAAAATGTTAGCCAGTCTGGAACTCCCAAATGCACGTGTGCAGCCTAAGCCATCTAATGCTCCGAATCTGGATGCCAAGATTCGGACTGAGAAACATGGCGTGAACAATATTCCATCTACTTCCTCTGCCTTGCCCAAATCCTCTACAAGAAATGTCTCGAAACCAGAAAAGCCCACAGGAACCTCAAACCTTGGTCGTGTATTTGGGAGTAATTCCCGTGCTTCAAGCAGCTGGATTCCTTCATTACGCCGAATTTCTTCGGCCAAATAG 1281 0.4083 MERVIGGKFKTGRKIGSGSFGEIYIASNMDTSEIVAIKMENKKTKHPQLLYEAKLYSILQGESGVPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRNFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKSNQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICDKKLSTPIEMLCKSYPVEFATYFHYCQSLTFDQHPDYGYLKRLFRDLFKREGYDSDYIYDWTILKYQKLQQTKKQNQSSPSAALPSNLESAVVEKHKGANDSTHVNVTKMLASLELPNARVQPKPSNAPNLDAKIRTEKHGVNNIPSTSSALPKSSTRNVSKPEKPTGTSNLGRVFGSNSRASSSWIPSLRRISSAK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1112 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pvu9g1112 426 MobiDBLite consensus disorder prediction 370 426 - -
Pvu9g1112 426 PANTHER CASEIN KINASE-RELATED 1 411 - -
Pvu9g1112 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu9g1112 426 Pfam Protein kinase domain 9 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1112 426 MobiDBLite consensus disorder prediction 345 426 - -
Pvu9g1112 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pvu9g1112 426 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 411 - -
Pvu9g1112 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1112 426 Gene3D Transferase(Phosphotransferase) domain 1 1 341 - -
Pvu9g1112 426 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1112 Pvu-Chr9 16324586 16332441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1112 9 223 AGC Kinase Gene Family AT3G08720 26.941 8.53e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu9g1112 Pkinase 1.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1112 K08960 K08959 gmx:100792736 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1112 9 16324586 16332441 Pvu1g0758 1 9955619 9960725 PCT