Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1093 ATGGAAGGTGAGAGGACAATCCCTGCTGTAGATGGGGTGACAGATGGCGTTCAGAAAATTAGAGCTCTGCACGGGAGGACTACTGGCCCTACCAGGCGCTCTACAAAAGGACAATGGACACCTGAAGAGGACGAAATTTTGCGGAAGGCTGTCCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAAGGTCCATGGTCTAAGGAGGAGGATGAAATAATTATTGATTTGGTGAATCGATATGGGCCCAAGAAGTGGTCTACTATTGCACAGAAGTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGTGCGCATCAGATTTACGGGAACAAATGGGCAGAATTAGCGAAGATATTGCCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAATAGTTCCGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAGTTACAAAATGTACCACTTGCTGGAAATCCGAATCAACCTATTGCTTCAGTCTCTTCGAGGTTGCAGCAGAGTGGAGAAGATAACGGTCCTAGGGGGACTGAAGGAGATGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCTGGTTACTTTTCATCAGCCAGAGAAATGAACAGTGTTGCTTTACTAACTGGAGAGGAATACAGGCCAAATGAAGAGCCTAGTCAAGCATCCTGTTCAGAGCCATATTACGTGTCTCTGGATGAAGTAACTGCATCCCTTCCAGACATTTCTGGCCAAGAGATTTGCACTTCTCAATTCGTTGAACAGAAATATTCACACAACCGTGGAAATTCCAATAACGGGGAAGGACAACTTGATTTAATTGACTTGACCAATATTTCCTCACTGGAGTTTGGGCAGGAATCATCACAGTTGCAAAATGATTGCATGATGAATGTTCCATTTCAGACTTCGGTGGGGTTAGGTGTCACAACAACCATGCGACCTACATCTATGGACTCTGTTAAACCCGAACACGTGTTGATGTCTGACGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGCGATGAATGTTTTTCTTCTGAAGATTATAATAAAGGTGTGAATATGGTTGACTTATTAGGAGGTCCCTCATTTCTTTGTCCGTCATCACTACCATTTGTCCCCTCAGTTGTTTCTTCTACTGGAGATAGGTTGATGTATACGGCAGAGAGCAATCGGTTGGTTGAGTCTGAGGGTCAGCAGTTTGTCTCCAGAACGCAGGATAACACAATTTATGCCAGTGACTTGTCCAGAACACCTTGTACCCATAGGATAGACAACACTGAAATGCATGAGCCTTCAGATGTTGTCAAAGATGATTCAAAATTGGTCCCTGTAAATAATTTTGGCTGTGGATCAGATGCAAAGTCAACTTCATATCCAACGGACGAAAATTCAAATATGCATACAGAACAGAACACAGGTGCTCTATGTTATGAACCTCCCCGCTTCCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTGTACAATCTGGGGGCGATATGCAACAAGAATTCAGTCCCCTTGGTATTCGCCAATTTATGATGTCTTCTATGAACTGTCTAACTCCTTTTAGATTATGGGACTCACCTTCTCGGGATGATAGCCCAGATGCTTTGTTAAAAAGTGCAGCTAAAACCTTCAAAGGTACACCATCTATATTAAAGAAACGAAACCGAGATCTCTTATCTCCACTATCGGAGAAAAGAATTGACAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGATGACAATGAGACACTGGGAGCAGATTTGCTTCCTCCGTCTTCAATGCCAAAAAAGGACTCTGGTACCTCTGTTGAAGATGATAAAGAGAATTGTGGACAAGCCGTTAGAGTGGAACGACTAGAGGAAAAAAGTAAGCATGCTATTTTGGACGACAAAAATTCTGAAAAAGATTCAGGTGATGGTAATTCTCAGGACAAAATTAAGCAACCTATTGCTGTTGATTCTGCGATCGAGAATGATGTTAGTGCTGCTGTTGAGATTGTGCAACAACCGTCTGGAGTTTTGGTTGAACATGATATGAATGACCTACTAATGTATTCACCAGATCAAGTAAACTTGAAATCAGAAAGAGTTCCCAGTTTAAGTGCTAGAACTATAAAAAATCCGTGCTCAAAGATTAATTCACCATCTGTTTGGTTAAAGGAGCATGAAAGACTTTCAGTTGCCGTTACTTGTATACATTCTGTCAGTACATCAGGCCCAGGGGAGAATTCGGGTGATCACACTGGAAACGATGGTGGTCTTGAAACATGTAGCATATTTGGTGGAACACCGTTTAGGAAAAGCATTGAATCGCCTTCAGCATGGAAATCTCCTTGGTTCATCAACACTTTTTTGTCCAGTCCCAGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTTATGAGCCCTGGTGACAGAAGCTACGATGCAATCGGGTTGATGAAACAGATCAATGAACAAACTGCTGCTCAGTATGCCAGTGCTCATGCGATCTTAGGAAATGAAACTCCTAAGGCTTTACCTAGAGGTAAGTCCAGAAACGATGGGGATGAAGACCGGGATGATATCGATCCTAATAATCAGCATGGGGACCATTCTCAGTCGGCTTCAAGTGCCTTGGTGGAACGACGTGTGCTTGACTTTAGCGAATGTGGAACTCCGGTCAAAGGTGACAGCAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCAACTTCGTATTTGTTGAAGGGCTGTAGATAA 2967 0.422 MEGERTIPAVDGVTDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQKLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNKWAELAKILPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQNVPLAGNPNQPIASVSSRLQQSGEDNGPRGTEGDEVSQCSQESANAGYFSSAREMNSVALLTGEEYRPNEEPSQASCSEPYYVSLDEVTASLPDISGQEICTSQFVEQKYSHNRGNSNNGEGQLDLIDLTNISSLEFGQESSQLQNDCMMNVPFQTSVGLGVTTTMRPTSMDSVKPEHVLMSDDECCRILFSEAISDECFSSEDYNKGVNMVDLLGGPSFLCPSSLPFVPSVVSSTGDRLMYTAESNRLVESEGQQFVSRTQDNTIYASDLSRTPCTHRIDNTEMHEPSDVVKDDSKLVPVNNFGCGSDAKSTSYPTDENSNMHTEQNTGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDSPDALLKSAAKTFKGTPSILKKRNRDLLSPLSEKRIDKKLEIEMTSTLIKNFSRLDVMFDDNETLGADLLPPSSMPKKDSGTSVEDDKENCGQAVRVERLEEKSKHAILDDKNSEKDSGDGNSQDKIKQPIAVDSAIENDVSAAVEIVQQPSGVLVEHDMNDLLMYSPDQVNLKSERVPSLSARTIKNPCSKINSPSVWLKEHERLSVAVTCIHSVSTSGPGENSGDHTGNDGGLETCSIFGGTPFRKSIESPSAWKSPWFINTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQINEQTAAQYASAHAILGNETPKALPRGKSRNDGDEDRDDIDPNNQHGDHSQSASSALVERRVLDFSECGTPVKGDSSKSSAMSFSSPTSYLLKGCR* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1093 988 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 964 982 - -
Pvu9g1093 988 Gene3D - 141 201 - -
Pvu9g1093 988 ProSiteProfiles Myb-like domain profile. 83 134 IPR001005 -
Pvu9g1093 988 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Pvu9g1093 988 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Pvu9g1093 988 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 917 937 - -
Pvu9g1093 988 PANTHER TRANSCRIPTION REPRESSOR MYB5 11 427 - -
Pvu9g1093 988 PANTHER TRANSCRIPTION REPRESSOR MYB5 543 987 - -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 673 716 - -
Pvu9g1093 988 PANTHER MYB PROTEIN-RELATED 543 987 - -
Pvu9g1093 988 PANTHER MYB PROTEIN-RELATED 11 427 - -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 209 246 - -
Pvu9g1093 988 CDD SANT 39 82 IPR001005 -
Pvu9g1093 988 SUPERFAMILY Homeodomain-like 85 181 IPR009057 -
Pvu9g1093 988 CDD SANT 90 134 IPR001005 -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 909 948 - -
Pvu9g1093 988 Gene3D - 88 139 - -
Pvu9g1093 988 Gene3D - 35 87 - -
Pvu9g1093 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 138 IPR017930 -
Pvu9g1093 988 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Pvu9g1093 988 CDD SANT 142 182 IPR001005 -
Pvu9g1093 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 189 IPR017930 -
Pvu9g1093 988 SMART sant 35 84 IPR001005 -
Pvu9g1093 988 SMART sant 139 187 IPR001005 -
Pvu9g1093 988 SMART sant 87 136 IPR001005 -
Pvu9g1093 988 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 658 721 - -
Pvu9g1093 988 MobiDBLite consensus disorder prediction 960 988 - -
Pvu9g1093 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1093 Pvu-Chr9 16052235 16059202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1093 20 988 MYB Transcription Factor Family AT4G32730 43.786 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g1093 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1093 - K09420 pvu:PHAVU_009G106700g 1960.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1093 9 16052235 16059202 Pvu9g1093 9 16052235 16059202 ECH
Pvu1g0629 1 7489629 7498373 Pvu9g1093 9 16052235 16059202 PCT