Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1067 ATGACGACGACGGAGTCCGATCTCGATAATGACTTTCCTAATCTCGATGAGCTCCGGTATCTGAACCTCGCCGGAACCGATGTCTTCGCCGCGTTCCAAAACCTATTACCGGATGCTATCACTTCATTTTCAACTTGTGGACTAACAGACCCTTTTTCTTCACAAAACCTAACTCCCAAGCATTCTACCATCACTGCTACAATTGATTCCCGGTCTTCCATTTGTGGGACTGCTACTGTTGGTAGTCCAGTGTCAGCTAATAAACCAGAGGGCTGGAAGAATGATATGAAAGGAGCCACAAGTGGCTCTTCTGAGCCATCTGATGAAGATGGTCCTTGTGAACAGAGCACAAATGCAGTTGAATTGAAACGTCTTAGAAGGAAGGTTTCTAATCGCAATTCTGCCAGAAGGTCAAGAAGAAGAAAACAAGCGCAGTTGGCTGACTTAGAGTCGCAGGTTGAAAAACTGAAAGTGGAAAACGCAACCCTATACAAGCAGTTCAATGATGCTAGTCAACATTTTCGTGAGGCTGACACGAACAACCGGGTGCTGAAATCAGACGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGACATGGTGACTAGAGGCTCTTTCACTACGTTAAACAATCAGCTTCTTCCTACACAGTGTCAAATGAGCACACCCCCGCCACTGAACACTACTAATCTGCGCCGCATGGCGCATGTTTCGCCAACCATCACTGTGCATGGAAATGACGGCGCATACAATGGCGCCACAGTTTGTGGACAGAATTCAGACCTTGGAAACTTGGACATGAGTTTCAACGACATGAACAATGTGAACGGAGTTATGAGCGATGGCATGAGTTGTGGGAGTATTTGGCCACCTTATTAG 882 0.4637 MTTTESDLDNDFPNLDELRYLNLAGTDVFAAFQNLLPDAITSFSTCGLTDPFSSQNLTPKHSTITATIDSRSSICGTATVGSPVSANKPEGWKNDMKGATSGSSEPSDEDGPCEQSTNAVELKRLRRKVSNRNSARRSRRRKQAQLADLESQVEKLKVENATLYKQFNDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTLNNQLLPTQCQMSTPPPLNTTNLRRMAHVSPTITVHGNDGAYNGATVCGQNSDLGNLDMSFNDMNNVNGVMSDGMSCGSIWPPY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1067 293 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 141 IPR004827 GO:0003700|GO:0006355
Pvu9g1067 293 Coils Coil 132 166 - -
Pvu9g1067 293 SUPERFAMILY Leucine zipper domain 122 173 IPR046347 GO:0003700|GO:0006355
Pvu9g1067 293 MobiDBLite consensus disorder prediction 78 118 - -
Pvu9g1067 293 MobiDBLite consensus disorder prediction 97 114 - -
Pvu9g1067 293 CDD bZIP_plant_GBF1 140 175 IPR045314 GO:0003700|GO:0006355
Pvu9g1067 293 Pfam bZIP transcription factor 121 171 IPR004827 GO:0003700|GO:0006355
Pvu9g1067 293 PANTHER BZIP TRANSCRIPTION FACTOR 1 292 - -
Pvu9g1067 293 SMART brlzneu 119 183 IPR004827 GO:0003700|GO:0006355
Pvu9g1067 293 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 121 184 IPR004827 GO:0003700|GO:0006355
Pvu9g1067 293 Coils Coil 181 201 - -
Pvu9g1067 293 Gene3D - 122 178 - -
Pvu9g1067 293 PANTHER BASIC LEUCINE ZIPPER 63 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1067 Pvu-Chr9 15693125 15697967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1067 69 291 bZIP Transcription Factor Family AT5G24800 49.784 2.97e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu9g1067 bZIP_1 2.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1067 K25784 - gmx:780555 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1067 9 15693125 15697967 Pvu9g1067 9 15693125 15697967 ECH
Pvu9g1067 9 15693125 15697967 Pvu1g0795 1 11306882 11310792 PCT