Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1064 ATGGATCCTCCCAAGAAACCTAACAAGATCAGGGAAATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGTTGCAAACTCTTCAAAAACAAGTGGAAGCATCAAGTTTCTGAAAAGAACACTTTCTCTGTCTGAACGTGAAGGAGGAGGATCGAGCAGTGTGGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCGTGGAGCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACCAAGCCTTTCACATGTTACTTAGAGAAGCTGAGGAAGAGTTTGGGTTTGAGCAAACTGGGGTTCTCAGAATTCCTTGTGAAGTCTCGGTGTTCGAGGGTATCTTGAAGATGGTGGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGATTTAGCATTGAGAAAATGATGGGATACTGTTCCTCCAACCACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAGATAG 480 0.4396 MDPPKKPNKIREIVRLQQILKKWRRVANSSKTSGSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVELSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFEGILKMVERKDKFFTQKCRFSIEKMMGYCSSNHLAYSHQPQSPMCR* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1064 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 159 IPR003676 GO:0009733
Pvu9g1064 159 Pfam Auxin responsive protein 21 120 IPR003676 GO:0009733
Pvu9g1064 159 PANTHER OSJNBA0060N03.10 PROTEIN 6 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1064 Pvu-Chr9 15660726 15661205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1064 5 159 Calmodulin-binding Proteins AT4G31320 51.042 1.02e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1064 K14488 - gmx:100527662 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1064 9 15660726 15661205 Pvu9g1064 9 15660726 15661205 ECH
Pvu9g1064 9 15660726 15661205 Pvu1g0799 1 11465367 11466138 PCT