Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1057 ATGGTCTTGATCACTTGGTTTTTGCCCTCATTGGCTGACAATGCTCAAGTTCTGATGAACTTCAAAAGATTCTTGTCCAATGCTGATGCTTTAAATAACTGGGGGAACCAATCAATTGGTGTGTGCAGCTGGACTGGTATATTGTGTTTCAATCAAAATTTTCATGGCTTGAGATTAGAAAACATGGGACTAAGTGGCACTGTTGACGTAGACACGCTGCTTCAGTTGACCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGAATTTAAGGGCGCTGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATTCCAGATGATGCTTTTGAAGGCATGAAACGTCTTAAGAGAGCATTCTTGGCTGAAAATGGGTTCACGGGTCATATTCCTACTTCCTTGGCTAAATTGCCTAATCTTTTGGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTGTCTTACAACAAGTTAGAGGGTCAAATACCAGAAAGCTTAAGCAGCAAGGATCCTGGCTCATTTGCTGGCAATCAAGGTCTATGTGGAAAGCCTCTAAGCCCCTGCATTGGAAGCCCCACCTCACCCCCGAGCACAGACACGGATGAACACCCAAATTCACATCCTGAAAAAGAAAACAAGGAAAAACGCGTTATTTTAACAGTTATTGTAGTGGTGGGGGTGATTGTGCTGGCTTCAATACTAGCACTTTTGATAATCCGTTACCGTCGAAAGAAACCCGAACTGGTAAAAGATGCACAACCCCAGAATGTTACTGCTTTTTCTAGCGAGTCCAAATCCATTGTTCTGACAACTGAACCCAAGAAAAGTGAAGACGGAGGGTTGAACTTCGTTAGGAGCGAGAGGGAGGGGATTGACATGCAAGACTTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACAACGTGGGGAAGAAAGAGTTTTTTGAGCACATGAACAGGCTTGGAAAATTGTCACACCCCAATCTGCTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCACGACTTCGCTGAAAATGGCAGCTTGGCAAGTCATCTTCATGGAAGAAGTGGGGTTGAGTTGAACTGGGGAACTCGTTTGAAGATCATAAAGGGAGTGGCCAGGGGGTTGGCTTATCTGTACACAGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCTAACGTTGTACTGGACGGTTCCTTCGAGGCTTGTTTGGCAGAGTACGGCCTTGTGCCGGTGGTGGAGAGGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCGGAGGCGAGCCAGTTGGAGAAGCCGAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAATTATCTGAGACATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCGATAGTGGGGGAAGGGTGGAGTGGGGAGGTTCTTGATAAGGGGATTCCAGGGAGAGGAAGTGGAGAGGGTGAGATGGTGAAGCTTTTGAGGATTGGAATGGGATGCTGTGAATGGAAGTTGGAGAACAGGTGGGGTTGGAAGGAGGCTGTGTCAAAGATTGAGGAGTTGAAGGAGAGTGATGATGGTGGTGAAGGGGACAATCTCAACTCACTGTCTACCAGTCTCGATGACTTCTCTCTCTCACGCTCTACTTCATGA 1872 0.4696 MVLITWFLPSLADNAQVLMNFKRFLSNADALNNWGNQSIGVCSWTGILCFNQNFHGLRLENMGLSGTVDVDTLLQLTNLNSFSVINNNFEGPMPEFKKIVNLRALFLSNNKFSGEIPDDAFEGMKRLKRAFLAENGFTGHIPTSLAKLPNLLDVDIHGNSFEGNIPEFQQRDFRVFNLSYNKLEGQIPESLSSKDPGSFAGNQGLCGKPLSPCIGSPTSPPSTDTDEHPNSHPEKENKEKRVILTVIVVVGVIVLASILALLIIRYRRKKPELVKDAQPQNVTAFSSESKSIVLTTEPKKSEDGGLNFVRSEREGIDMQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNVGKKEFFEHMNRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWGTRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEACLAEYGLVPVVERSHAQQFMVAYKSPEASQLEKPSEKSDVWCLGILILELLTGKFPANYLRHGKGASEDLAAWVNSIVGEGWSGEVLDKGIPGRGSGEGEMVKLLRIGMGCCEWKLENRWGWKEAVSKIEELKESDDGGEGDNLNSLSTSLDDFSLSRSTS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1057 623 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Pvu9g1057 623 Gene3D Ribonuclease Inhibitor 174 213 IPR032675 -
Pvu9g1057 623 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Pvu9g1057 623 MobiDBLite consensus disorder prediction 603 623 - -
Pvu9g1057 623 SUPERFAMILY Protein kinase-like (PK-like) 327 593 IPR011009 -
Pvu9g1057 623 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Pvu9g1057 623 SUPERFAMILY L domain-like 13 193 - -
Pvu9g1057 623 Gene3D Ribonuclease Inhibitor 12 171 IPR032675 -
Pvu9g1057 623 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Pvu9g1057 623 Pfam Protein tyrosine and serine/threonine kinase 327 520 IPR001245 GO:0004672|GO:0006468
Pvu9g1057 623 MobiDBLite consensus disorder prediction 594 623 - -
Pvu9g1057 623 PANTHER LRR RECEPTOR-LIKE KINASE 5 604 - -
Pvu9g1057 623 ProSiteProfiles Protein kinase domain profile. 323 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1057 623 Pfam Leucine rich repeat N-terminal domain 13 49 IPR013210 -
Pvu9g1057 623 MobiDBLite consensus disorder prediction 210 237 - -
Pvu9g1057 623 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1057 Pvu-Chr9 15601579 15603919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1057 14 623 Receptor kinase-like Gene Family AT5G35390 45.197 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu9g1057 PK_Tyr_Ser-Thr 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1057 - - gmx:100803999 958.747