Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1045 ATGGCAGTGGAGTTGATGAGCTTGCCGAAAATGGAGGAACAGAAGGCAATTGAAGAAGCAGCGACGTTGGGCCTGAAGGGAATGGAAAACTTCATCCATCTCCTCTCCCACCAACCCTCCAATCTCAACACTCACCTCACCCACGCAACCGTTTCAAACTTCAAAAAACTCATCTCCTTGCTCAACAGAACCGGCCACGCCCGTTTCCGCCGCGCACCTCTCCCTTCAAACACCCACCCCATTCCGCCGGCTAACCCGGTTCCCCTCCACCAACCTCCCTCGCACACTCTCACTCTCGATTTCACCAAACCTAACATCTTCGCCTCCACCGACGCCAAGTCCACGGATCTCGAATTCTCCAAGGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATCTCCTCCGCCCTCACCGCCGACGGCAGCGTCTCCAACGGCAACCAAGCCTCCTCTCTCTTCCTCGCCCCGCCTCCGCCGCCCTCTTCCTCCGGAAAACCACCTCTCCTCAAGAAGAGGTGCCGCGACCACTCCGACAACGTCTCCGGTAAACTCTCCGGCTCCACCAAGTGCCACTGCATTAAGAAAAGGAAAAACCGGGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTGCGAAGATCGCCGATATTCCGTCGGACGAGCACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTACCCGAGGGGGTATTACAAGTGCAGTACGGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTTCGGACGATCCCACGATGTTGATTGTGACGTACGAGGGGGAGCACCGTCATTCCTTTCAGACCGCGATGCAGGACAACATTTCCGGCGCCATGGGTTTGGTTTTTCAGTCAAAATAG 891 0.5668 MAVELMSLPKMEEQKAIEEAATLGLKGMENFIHLLSHQPSNLNTHLTHATVSNFKKLISLLNRTGHARFRRAPLPSNTHPIPPANPVPLHQPPSHTLTLDFTKPNIFASTDAKSTDLEFSKETFSVSSNSSFISSALTADGSVSNGNQASSLFLAPPPPPSSSGKPPLLKKRCRDHSDNVSGKLSGSTKCHCIKKRKNRVKKTVRVPAISAKIADIPSDEHSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSFQTAMQDNISGAMGLVFQSK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1045 296 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1045 296 SUPERFAMILY WRKY DNA-binding domain 215 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1045 296 Gene3D WRKY domain 206 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1045 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 281 IPR044810 GO:0003700
Pvu9g1045 296 Pfam Plant zinc cluster domain 170 215 IPR018872 -
Pvu9g1045 296 SMART WRKY_cls 217 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1045 296 PANTHER WRKY PROTEIN 10 281 - -
Pvu9g1045 296 ProSiteProfiles WRKY domain profile. 212 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1045 296 MobiDBLite consensus disorder prediction 148 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1045 Pvu-Chr9 15494961 15496400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1045 1 295 WRKY Transcription Factor Family AT2G24570 59.692 1.46e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g1045 WRKY 7.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1045 - - vun:114196171 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1045 9 15494961 15496400 Pvu9g1045 9 15494961 15496400 ECH