Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1022 ATGGAGGATCAAGCGAATCAAGCGCCACCGCCGCACGATGAAGACGACGATTCTAAGAAGGAAGAAGACGAATTGATTACGAAGGTTAACAAACTCATGGAGAAGATCACTTCTGCACCTGATAACCCTAAGGCCACCGTTCTCCACGCCCTTGCCTCTATTCTCGAAACACAAGAGTCACGATACATGGACGAGAATGGTCATTCTTCCTCTAGTACTGCCCGTGCTGCGCATGTCATTGGTCGTCTTGGCGGTTTAATTCGGGAAAATGATGAGTTTTTTGAGTTGATATCTTCAAAGTTTCTGTCAGAAACAAGATACTCAACTTCTATTCGAGCTGCTGCTGGAAGACTTCTCCTGTGCTGTTCCCTAACATGGATTTATCCTCATGTTTTTGAAGAACCGGTCATGGAAAACATAAAAAATTGGGTGATGGATGATAACACTGGGATGTCTTCTGAAGAGCAGAATCTGAAGCAAAGTTCAGGGAAAAGGGAGGCATCGGATTCTGAAATGTTGAAAACCTATTCTACCGGACTCCTTGCTGTTTGTTTGGTTGGTGGAGGTCAAATTGTGGAAGATGTCTTGACATCAGGCTTGTCAGCTAAACTTATGCGATACCTTCGTTTACGTGTTCTGGGAGAGACAAGTAGCAACCAGAAAGATGTTACTCATATAACAGAGAGTAGGCATGCATCTGCGAATACTTCAGGGAGAGGTAGAGATGATGGTCGTGGTAGATTTCGCCAGATCCTTGAACCAAATCATTTGGATGATACTAGGATTATTGATGAGAGATCTTTAGATGATGTAATTCTTGAAAGGGGTCCAGATAGAAGCATTAGTGGACAAACACTTCAAGAAGGATCTTGGATGGAAGGTAAACCACCTGATGGGCTTGGTGAAGGTGTTGATGTCCAGGAGGTAGATTCTGATGGGGAGGATAGATGGCGCTATAGAGATACACGTGATGGAAGGACAAAATACAGTGAACATGATGACAATGTTAGAGATGACTCTTCAAGGCGACGATCAAACCGTGGATGGGGAAGATCTAAAGGGAAAGGAAGGGTTAATGAAGGGACTGTAGAAAGTGATTCCATTTTATCATCTCCTGGTTCTGGTAGTCGGTTGGTACATGGTCGGAGAGATAGAAGTGTACTGAGGAATGCTGATGTTAGGAGGGTGTCTGATTCTAAGAAGACCCCTGGCAGGACCTCTTTGGAGGCTTCTGGTTTTGAAAGAGAGGATCATGATGACTGTTTCCATGAATGCCGAATTGGAAATAAAGATATAACCGATCTTGTCCGGAAAGCAGTTCAAGCTGCTGAAGCCGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCTGCTGACCTGGTTAAAACTGTCGCTTCAGAGGAATATAAGTCCTCTAACGATGAAGAAGCAGCTATTTTGGCTGCTTCTAAAGCTGCATCAACTGTTATTGATGCTGCAACTGCAGTTGAAATTTCAAGGAGTTCCATTGGCAACAATACTGTAACAGAGAATGAGAGTGGTAAAGAAACAGAAACTAATGAGGATGTGGAGGAGCACTTCATCCCAGATACTCAATCACTTTCACAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTTGGAGAATATGTGGAAGTGCTTGGCCCTGTGTTGCATGAGAAGGGGGTTGACGTGTGTCTGGCACTTCTGCAGCAGAATTCTAAACATCGGGAGCCATCCAAGGTTGCTTTGCTGTTGCCTGATGTCATGAAGCTAATCTGTGCTTTGGCCGCACATAGAAAATTTGCTGCACTGTTTGTGGACCGAGGGGGAATGCAAAAGCTTCTTGCTGTCCCTAGAATGGCACAAACTTTCTTTGGTCTTTCTTCTTGTCTATTCACTATTGGTTCTCTTCAGGGTATAATGGAAAGGGTTTGTGCTCTTCCATCGCAAGTTGTTTATCACGTTGTTGAATTAGCTCTCCAACTTCTTGACTCCAATCAAGACCAAGCCCGGAAGAATGCAGCATTATTTTTTGCTGCTTCGTTTGTCTTCAGAGCTGTTCTTGATGCCTTTGATTCCCTAGATGGATTACAAAAATTACTGGGCCTTCTAAATGATGCTGCTTCTGTAAGATCAGGAATAAATTCTGGAGCCTTGAGTTTATCTAACTCAGGATCACTTCGAAACGATCGATCGTCTGCAGAAGTGCTGACATCATCAGAGAAGCAGATAGCCTATCACACTTCTGTTGCTTTGAGGCAATATTTCAGGGCCCATCTCCTTGTGTTAGTGGATTCCATTCGTCCTAACAAGAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTGTAAGAGCAGTGTACAAGCCCCTTGATATTAGTAATGAGGCAATGGATGGAGTATTCCTACAATTACAAAAAGATCGGAAGCTAGGTCCTGCATTTGTTAGAACACGTTGGCTAGCAGTTGAGAAGTTCTTGGCATATAATGGACATGTTACCATGCTGGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTGCATGATTTGCTTCAGTATGCTTTGGGTGTTCTGCACATTGTTACATTGGTACCTAGCAGTCGTAAGATGATCGTAAATGTAACTTTAAGCAACAATCGTGTTGGTATTGCGGTAATTTTGGATGCTGCAAATATAGCTAGTAATCATGTGGACCCCGAGATAATTCAACCAGCATTAAATGTTTTAGTCAATCTTGTTTGCCCTCCACCTTCAATAAGCAATAAACCGGCAATGGTTGCACAAGGGCAGCAGTTGGCATCCTCCCAGACATCCAATGGTCCTCCCTCAGAGGCTAGAGATAGAAATGTTGAACGAAATGTTTCAGATCGAGCTGTTCACTCTACTAGCCAGATTGATCCTAGGGAAAGGAATGGGGACTCCAATGCTATAGATCGAGGCAGTGCTGCCAGCTTAAGTGCACAGCCTGTTAGTAGTACACCACAAACTCCTGTTGCTTCTGCCACATCTGGATTGGTTGGCGATCGAAGAATATCTTTGGGTGTTGGAGCAGGTTGTGCTGGCCTTGCTGCACAATTGGAACAAGGATATCGTCAGGCAAGAGAGACTGTCCGATCTAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGCATATATTCACCTCCTGCTGCGCTGGACTGTCTTCGAGCTCTAGCATGTCGAGTCCTGCTTGGATTAGCCAGAGATGATACAATTGCACACATATTGACAAAGCTACAGGTTGGGAAAAAGCTGTCAGAACTGATTCGGGATTCTGGTAGCCAAACACTTGGAACGGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCTGCCATTGAACTTATTGGGATTGTGACTAATTCAGGCCGTGCAAGTACATTAGCTGCTACTGATGCTGCTACTCCTACTTTAAGGCGCATAGAAAGAGCAGCTATTGCTGCTGCTACTCCTATTACTTACCATTCAAGGGAACTTTTGCTTCTAATTCATGAACACCTACAGGCATCTGGGTTAGCACAAACTGCTTCTATGTTGCTTAAAGAGGCGCAATTTACTCCTTTGCCATCAGTGATTCCTCCGTCTTCTCTTGCCCAACAGCCCACAACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTACTCCTTCTGGATTTCTCTCTAACAAATTAAAGTTTAATTCAAAGGATGAGGATGCTGTCTTGAAAAGTGATTCTGTCTCTGCAAAGAAAAAATCACTAACTTTCTCATCATCTTTTCATTCAAGACTCCAACTTTTTGACTCTCAGCAATCATCTGTAAAGAAATTTTCAAATACTGCTAAAGAATCTTCAGAAATTAGTGTAGTAGAGACTGGATCTGAATATTCAATGAAACATAACATTGATATTGGATCTCAGTTTAAGACTCCAATAACTTTGCCAGCAAAACGGAAGTTATCTGATTTGAAGGACATACCAACGTTTTCTTCATCTGGAAAACGGTTAAATGTTGGGGATCAAGGACTCCGCTCTCCTATTTGTTCGAGTGCAATTCGTAAAAGCAGCCTGCAGCCTGATGCAGTTGGATTTTTCACTCCAACTTGTAACCTGAAAAATCAACACACCCGTTGTATGGGTGACTTGGTGGATGAGAATCAGTGCAGTACTTCACATCTAGGTCATATGACACCATCTTCCCAAGTATTAAACGACCTTCAGCCCAGCAACCCTGAGTGTGTAACATTAGATTCTTTAGTGATTCAGTATTTGAAGCATCAACATCGCCAATGTCCAGCTCCTATTACAACACTTCCTCCGCTGTCACTTCTGCACCCGCATGTCTGTCCTGAACCAAAGCATAGCCTTGATGCCCCTTCTAATGTGACAGCCAGGCTTGGTACTCGCGAGTTTAAATATATGTATGGGGGAGTACATGGGAATCGCAGGGATCGTCAACTTGTTTACAGCCGGTTTAGGCCTTGGCGCACTTGTCGGGATGATGCTGGTGCATTGTTAACATGCATTACATTTGTTGGGGACTCCTCACATATTGCAGTTGGAAGCCATAATGGGGAGCTCAAATTTTTTGAATCCAACAACAGCAATGTAGTTGAGAGCTACACAGGTCATCAGGCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGTGAGACCCAGCTATTACTTTCTTCAAGCTCCCAAGATGTTAGGTTGTGGGATGCAACTTCGATTTTAGGTGGTCCTAGCCATTCATTTGAAGGATGCAGGGCAGCCAGGTTTAGCAATTCTGGGAATGTTTTTGCAGCCCTGTCATCAGAATCTTCAAGGCGAGAGATCCTCTTGTATGATATTCAAACATGTCAGTTAGAGTCAAAGTTGTCAGATACATTTGCAACTTCTACAGGGCGAGGTCACGTTTATTCTTTAATCCATTTTAACCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTGTGGGATCGTCGTGTCTCTGGGCCTGTTCATCGGTTTGATCAGTTTACAGATTATGGTGGTGGAGGCTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATCTGCGCAAGTTCAGATTGCTACGCAGTGTGCCTTCATTGGATCAAACATCAATAACATTCAATGCGCGTGGTGATGTAATGTATGCTATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTTCACACACGACGGGTCAAGCATCATCTTTTTTCAGCTTTCCGCACAGTGGATGCAGTTAATTATTCTGACATTGCAACTATCCCTGTGGATCGCTGTGTTCTTGATTTTGCAACTGAGCCTACAGATTCATTTGTTGGGCTGATTACTATGGATGATCAGGAGGAGATGTATGCTTCTGCCAGAATCTATGAAATTGGTCGTCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCTGAGAGTGAGGAGGAAGATGAGGATGATGATGATGATGATGATGATGGTGATGTTGATCCTACTTTAGGCCCTGGTCTTGGTGGGGATAGTGGCAGTGATGCTGATATGAGCAATGATGATGAGGATGACGATAGTGTGAGTGATCTTGATGAAGATGAAGATGGAGACTTTATTTTGGATGATGTAGACTTTGATGGTGGAACTGGCATATTGGAGATTGTGACAGAAGGTGACGAAGATGATGATGATAGTCAGGTACTTGAATCCTTAAGTAGTGATGATGAGGATTTTGTGGGCAATGGCTTTGGTTATTAA 5817 0.4365 MEDQANQAPPPHDEDDDSKKEEDELITKVNKLMEKITSAPDNPKATVLHALASILETQESRYMDENGHSSSSTARAAHVIGRLGGLIRENDEFFELISSKFLSETRYSTSIRAAAGRLLLCCSLTWIYPHVFEEPVMENIKNWVMDDNTGMSSEEQNLKQSSGKREASDSEMLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSSNQKDVTHITESRHASANTSGRGRDDGRGRFRQILEPNHLDDTRIIDERSLDDVILERGPDRSISGQTLQEGSWMEGKPPDGLGEGVDVQEVDSDGEDRWRYRDTRDGRTKYSEHDDNVRDDSSRRRSNRGWGRSKGKGRVNEGTVESDSILSSPGSGSRLVHGRRDRSVLRNADVRRVSDSKKTPGRTSLEASGFEREDHDDCFHECRIGNKDITDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTVASEEYKSSNDEEAAILAASKAASTVIDAATAVEISRSSIGNNTVTENESGKETETNEDVEEHFIPDTQSLSQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREPSKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSQVVYHVVELALQLLDSNQDQARKNAALFFAASFVFRAVLDAFDSLDGLQKLLGLLNDAASVRSGINSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTSVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDGVFLQLQKDRKLGPAFVRTRWLAVEKFLAYNGHVTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNVERNVSDRAVHSTSQIDPRERNGDSNAIDRGSAASLSAQPVSSTPQTPVASATSGLVGDRRISLGVGAGCAGLAAQLEQGYRQARETVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAQTASMLLKEAQFTPLPSVIPPSSLAQQPTTQEASSTQIQWPSGRTPSGFLSNKLKFNSKDEDAVLKSDSVSAKKKSLTFSSSFHSRLQLFDSQQSSVKKFSNTAKESSEISVVETGSEYSMKHNIDIGSQFKTPITLPAKRKLSDLKDIPTFSSSGKRLNVGDQGLRSPICSSAIRKSSLQPDAVGFFTPTCNLKNQHTRCMGDLVDENQCSTSHLGHMTPSSQVLNDLQPSNPECVTLDSLVIQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKHSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQLVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFESNNSNVVESYTGHQAPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCRAARFSNSGNVFAALSSESSRREILLYDIQTCQLESKLSDTFATSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHHLFSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDDDGDVDPTLGPGLGGDSGSDADMSNDDEDDDSVSDLDEDEDGDFILDDVDFDGGTGILEIVTEGDEDDDDSQVLESLSSDDEDFVGNGFGY* 1939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 219 234 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 310 346 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1868 1895 - -
Pvu9g1022 1938 PANTHER VPRBP PROTEIN-RELATED 992 1279 IPR033270 GO:0016567
Pvu9g1022 1938 PANTHER VPRBP PROTEIN-RELATED 331 955 IPR033270 GO:0016567
Pvu9g1022 1938 PANTHER VPRBP PROTEIN-RELATED 14 255 IPR033270 GO:0016567
Pvu9g1022 1938 PANTHER VPRBP PROTEIN-RELATED 1280 1817 IPR033270 GO:0016567
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 378 402 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 935 954 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 935 1013 - -
Pvu9g1022 1938 ProSiteProfiles LIS1 homology (LisH) motif profile. 1174 1206 IPR006594 GO:0005515
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1210 1234 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1908 1924 - -
Pvu9g1022 1938 Gene3D - 1507 1831 IPR015943 GO:0005515
Pvu9g1022 1938 PANTHER BNAA03G51310D PROTEIN 14 255 - -
Pvu9g1022 1938 PANTHER BNAA03G51310D PROTEIN 992 1279 - -
Pvu9g1022 1938 PANTHER BNAA03G51310D PROTEIN 331 955 - -
Pvu9g1022 1938 PANTHER BNAA03G51310D PROTEIN 1280 1817 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 219 247 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1830 1853 - -
Pvu9g1022 1938 SUPERFAMILY WD40 repeat-like 1520 1742 IPR036322 GO:0005515
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 274 414 - -
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 987 1012 - -
Pvu9g1022 1938 SMART Lish 1174 1206 IPR006594 GO:0005515
Pvu9g1022 1938 MobiDBLite consensus disorder prediction 1816 1938 - -
Pvu9g1022 1938 SMART WD40_4 1506 1546 IPR001680 GO:0005515
Pvu9g1022 1938 SMART WD40_4 1594 1632 IPR001680 GO:0005515
Pvu9g1022 1938 SMART WD40_4 1549 1589 IPR001680 GO:0005515
Pvu9g1022 1938 SUPERFAMILY ARM repeat 552 1089 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1022 1533 1739 U-box Gene Family AT2G33340 25.000 5.16e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1022 K11789 - gmx:100796030 2998.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1022 9 15180583 15189926 Pvu9g1022 9 15180583 15189926 ECH