Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0998 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACTAGCAACACTGTCAACCAGGCTTTGGTGCTTCATGACTTTCTGGGCATGAAGCCAACCACTGATTCTCCCAAAACCACCGATGTAAGGTTGTCGGAACCGTCAGCCTCCGCCTCCTCCGCAGGTGGGCGTGGCCCTTTCTCTGCCACCTCTGACATCGCTTCTGAGAAGCAGGTAGGAAACCATCTTGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATCTTTCTGGTACTGAGATCAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCCGATTCCGCTTTTACGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTATCAAAATTCACATTTGATGAAGGTCCTCCGGAATGCAGCTGGAGGAGATAGGTCTAGAAGGCCCAGTGAGGATGAAGTGTTACTTGGTATGCAGTCAATGAAACAATCTTCTCAGATATTTCAGCCTCCCTCCAGCTCTAAGATTGATGCCAATAAGTGGGAACGATCTATTCTCATGAACGTTGGCCCTTTGCAGCATCCACCCCGTGGAGGGCAATTGACACCTTTTGTCCACCAAATGGCCTCAAGCAAGATTAGGGATACCAATGCTGGTCCTTCGTTCATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATAAACGCAGCTGCTATGGGCACTGAGAAAACTCCATCTGCTGTGATGCTTGGTGGCAGCAGGCCAAAGGCTGGAAGTAATATCATAGAATCATCCACACCTCCAAGTCAGCCTGCCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGTGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAATGGTGGATCTTGGTCGACTGCGTTCTCACCTAAATCTGCTGTAAAAATGGTTAATGATGGGAACTTGCACAGTGGAGAAAATGAAACAGGTGTAGTGAATAATGCAGCATTCCCTCAGGAGCTTCATGGGAAATTGTCTATTACTGGAAGTTCTAGCCATGCCATGGGGCCTGGTGATCGAGTAACTACTCCTGCAGGGGCACACCAAGGTAGCATTTTTGCTAAAGATACCAGAAATCCAGTCCAACCATCAGATCCAAGTTCTGAAGACAAAAGAGGACAGTGA 1236 0.4782 MAVLLRMAQPHNGNTSNTVNQALVLHDFLGMKPTTDSPKTTDVRLSEPSASASSAGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGTEISNRLVGSKRSNSDSAFTGSSRDAFQMVPDSYQNSHLMKVLRNAAGGDRSRRPSEDEVLLGMQSMKQSSQIFQPPSSSKIDANKWERSILMNVGPLQHPPRGGQLTPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINAAAMGTEKTPSAVMLGGSRPKAGSNIIESSTPPSQPALTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGNLHSGENETGVVNNAAFPQELHGKLSITGSSSHAMGPGDRVTTPAGAHQGSIFAKDTRNPVQPSDPSSEDKRGQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0998 411 MobiDBLite consensus disorder prediction 364 411 - -
Pvu9g0998 411 MobiDBLite consensus disorder prediction 35 64 - -
Pvu9g0998 411 Pfam tify domain 283 315 IPR010399 -
Pvu9g0998 411 ProSiteProfiles Tify domain profile. 281 316 IPR010399 -
Pvu9g0998 411 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 409 IPR040390 -
Pvu9g0998 411 PANTHER PROTEIN TIFY 8 52 409 - -
Pvu9g0998 411 SMART tify_2 281 316 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0998 Pvu-Chr9 14927858 14936283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0998 18 314 Tify Gene Family AT4G32570 42.308 1.37e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu9g0998 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0998 - - gmx:100807222 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0565 1 6421223 6425466 Pvu9g0998 9 14927858 14936283 PCT