Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0981 ATGTTATGGGTACGGAAACACGATAGACGCATGCAGATTGATCCGTGGTCCCAAGATGGAAGACAAAGCATCCTCAGCGGCGTTCCGCTTCCTTCTCTAGGCGCCGCAGCCGGCAGCACCGGGCCGAACCGCAGGATACGGCCATTCATCGTCTCGCCCTACAACCCTTATTACAGATTTTGGGACGCGTTGCTGGTGATCTTAGTTTTTTACACTGCATTTGTTAGTCCCTTTGAGTTTGGGTTTCTTAATGAACCAACGGATTCCCTTTCTATCACGGACAACGTGGTGAACGGTCTTTTTGCCATTGACATTGTTCTCACCTTCTCTGTTGCCTACCTGGACAAGGAGACATATTTGCTCGAGGACCGCCCGTTGTTCATTTGCTACAAATACGTCACAACATGGTTTGCCTTCGATGTCATCTCCACGATCCCTTCTGAATTTGCCGGCACTGTGTTGCCCGATCCTCTTCAGACATATGGCTATTTCAATATGCTACGTCTTTGGCGTCTCCGAAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTACTTTTGGATACGCTCTTGCAAGCTTGTATGTGTAACACTATTTTCAATGCATTTTGCTGCCTGTCTTTTCTATTTTATAGCTCTAAATCGTGATCCAAAATCAACATGGCTAAGCATGGTCTCTGAGAACACTCAAAAGAGTATTTACAATCGCTACGTAACATCAATCTACTGGTCAATAACGACTCTTACAACAGTTGGTTATGGTGACCTGCATCCCGTAAATACCAAGGAGATGGTGTTTGACATATTTTATATGATGTTTAACCTGGGACTAACGGCTTATCTAATAGGAAACATGACAAACTTAATTGTTCAAGGGACAAGCAGAACTAGAACATATAGAGACAACCTGCAAGCTGTCACAGATTTTGCCCACCGGAATCAGTTACCTATCCGCTTGCAAGAACAAATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAACAACAAGAAATTATTGATTCACTTCCAAAGGCTATTCGATCTAGCATCTCAGACTACCTATTCACCTCACTTCTTGAGAAAGTGTACTTGTTTCATGGGGTTTCATCTGACCTACTCTTTCAACTGGTCTCGGAGATGAGGGTTGAGTATTTTCCTCCAAAGGAAGAAGTAATTTTGCGGAATGAAGCGCCCACAGACATTTATATATTTGTTAATGGTGCCGCAGAACTCGTCATTAAAAGGAATGGAATAGAACAGGCGAGTTTGGTCGTTGGTGAGGCTGTAAGTGGAGATATAGTTGGAGAAATTGGAGTTCTATGCTATAGGCCACAGATATTTACAGTTCGAACAAAACGATTGAGCCAAATTTTGCGTATGAGCCGTACTGTATTTCTAAATCTAGTTAATTCAAATGTTGGAAATGGGGGAATAGTCATGAACAATTTTCTCCAGAATTTGGAAGAATCAAGTTATCCAGAGAGGCATGTTATTTTGGCAGAAACGGTGGCCAAGATTGTTCAGGGTAAAATGGATATGCCCATTAGCCCGTGCTTTGCAGCAATCAGAAATGATGATAGATTGTTAGAGAGTTTGCTAAAGAAGGGTTTAGATCCAAATGAAGGAGATAAGAAAGGAAAGACGGCACTGCATATTGCAGCTTCCAAAGGCAGTGAGCAGTGCGTAAGTTTGCTTCTAGAGTATGGTGCTGATCCAAATAGCAAAGATTTTAATGGAATTGTCCCACTACTGGAAGCAAGGAAGGGTGATCATAAATCTGTGATAAAACTTCTAAGAGAAAAGGGTGCAATTTTTACTTCTGCCGATGAAGGCAATCTAGCATGCAGGGCTGTTGAACAAAATAACAAAGAATTGCTCGAGGAAGTTATTGAATGCGGTGTGGCTGTGTCACAACCCAACAAAAATGGAGATACTGCTCTCCATATTGCAGTAGTTGACTCAAACAGTGACATGATTAACTTTCTTTTAGCCCAAGGAGCAGTCATAGATATGCCTGATGCTAATGGGCAGACTCCCAGAGTTTTGACAGAAAAACACGATAGTGAAGAGATTCACGCTGTAATAGATGACACGGGGGAGAGCATAAAACCAGCTGCTATTCCAATAACAAAGGATAGCAGTATTGGAAGGTTTCAAAGAGATCTCAGCATGTCTGCCACTTCCTACCAAAGCCTGCAATCTACTAGAGAGTTTACTTGGCAAGATAGTAAAGGGAGAAGAAGGTCTTCCAGCTCTTTCCATAATTCCCTTTTCGGAATCCTCTCTACTTCCAATCGTGAGAGAAGGGCAAGGGAATCTGAAAACAGTAAAAGTGTTAGAAGAAATGAGAGAGAGTTACCCAGAGTGATAATTAGTTGTCCTGAAAAAGGTGAACATGCTGGAAAACTTGTTTTGTTGCCCAAGTCCCTTGAAGAGCTGCTAGATATTGGTGCCAGTAAATTTGCTATATCTCCCACCAAAATTTTGACCACAGAAGGAGCAGAAGTAGACCATATAAATCTTATAAGAGATGGTGATCATCTTGTTATTGCCAGCGATGATTCCTAA 2598 0.4184 MLWVRKHDRRMQIDPWSQDGRQSILSGVPLPSLGAAAGSTGPNRRIRPFIVSPYNPYYRFWDALLVILVFYTAFVSPFEFGFLNEPTDSLSITDNVVNGLFAIDIVLTFSVAYLDKETYLLEDRPLFICYKYVTTWFAFDVISTIPSEFAGTVLPDPLQTYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWIRSCKLVCVTLFSMHFAACLFYFIALNRDPKSTWLSMVSENTQKSIYNRYVTSIYWSITTLTTVGYGDLHPVNTKEMVFDIFYMMFNLGLTAYLIGNMTNLIVQGTSRTRTYRDNLQAVTDFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIDSLPKAIRSSISDYLFTSLLEKVYLFHGVSSDLLFQLVSEMRVEYFPPKEEVILRNEAPTDIYIFVNGAAELVIKRNGIEQASLVVGEAVSGDIVGEIGVLCYRPQIFTVRTKRLSQILRMSRTVFLNLVNSNVGNGGIVMNNFLQNLEESSYPERHVILAETVAKIVQGKMDMPISPCFAAIRNDDRLLESLLKKGLDPNEGDKKGKTALHIAASKGSEQCVSLLLEYGADPNSKDFNGIVPLLEARKGDHKSVIKLLREKGAIFTSADEGNLACRAVEQNNKELLEEVIECGVAVSQPNKNGDTALHIAVVDSNSDMINFLLAQGAVIDMPDANGQTPRVLTEKHDSEEIHAVIDDTGESIKPAAIPITKDSSIGRFQRDLSMSATSYQSLQSTREFTWQDSKGRRRSSSSFHNSLFGILSTSNRERRARESENSKSVRRNERELPRVIISCPEKGEHAGKLVLLPKSLEELLDIGASKFAISPTKILTTEGAEVDHINLIRDGDHLVIASDDS* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0981 865 ProSiteProfiles Ankyrin repeat region circular profile. 555 586 - -
Pvu9g0981 865 Gene3D Jelly Rolls 340 506 IPR014710 -
Pvu9g0981 865 Pfam Cyclic nucleotide-binding domain 393 482 IPR000595 -
Pvu9g0981 865 SMART ANK_2a 555 584 IPR002110 GO:0005515
Pvu9g0981 865 SMART ANK_2a 619 648 IPR002110 GO:0005515
Pvu9g0981 865 SMART ANK_2a 588 617 IPR002110 GO:0005515
Pvu9g0981 865 SMART ANK_2a 652 681 IPR002110 GO:0005515
Pvu9g0981 865 PANTHER POTASSIUM CHANNEL AKT1 6 862 IPR045319 GO:0005249|GO:0006813
Pvu9g0981 865 ProSiteProfiles KHA domain profile. 798 865 IPR021789 -
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 105 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 242 259 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 268 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 PRINTS EAG/ELK/ERG potassium channel family signature 286 295 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu9g0981 865 Gene3D - 62 296 - -
Pvu9g0981 865 Gene3D - 525 706 IPR036770 -
Pvu9g0981 865 CDD CAP_ED 374 482 IPR000595 -
Pvu9g0981 865 Coils Coil 618 638 - -
Pvu9g0981 865 ProSiteProfiles Ankyrin repeat profile. 652 684 IPR002110 GO:0005515
Pvu9g0981 865 ProSiteProfiles Ankyrin repeat profile. 555 587 IPR002110 GO:0005515
Pvu9g0981 865 Pfam KHA, dimerisation domain of potassium ion channel 797 860 IPR021789 -
Pvu9g0981 865 SMART cnmp_10 374 494 IPR000595 -
Pvu9g0981 865 ProSiteProfiles cAMP/cGMP binding motif profile. 374 496 IPR000595 -
Pvu9g0981 865 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 6 862 - -
Pvu9g0981 865 SUPERFAMILY cAMP-binding domain-like 299 483 IPR018490 -
Pvu9g0981 865 Pfam Ion transport protein 59 301 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu9g0981 865 SUPERFAMILY Ankyrin repeat 528 705 IPR036770 -
Pvu9g0981 865 Pfam Ankyrin repeats (3 copies) 597 681 IPR002110 GO:0005515
Pvu9g0981 865 Pfam Ankyrin repeats (3 copies) 525 586 IPR002110 GO:0005515
Pvu9g0981 865 ProSiteProfiles Ankyrin repeat region circular profile. 652 683 - -
Pvu9g0981 865 SUPERFAMILY Voltage-gated potassium channels 53 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0981 Pvu-Chr9 14739060 14745836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0981 14 863 Ion Channels AT2G25600 53.766 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0981 K21867 - gmx:100802964 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0981 9 14739060 14745836 Pvu9g0981 9 14739060 14745836 ECH
Pvu1g0544 1 6103761 6111948 Pvu9g0981 9 14739060 14745836 PCT