Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0958 ATGCCTGAGCTGCTACACGGGATTCTGAAGGTAACCATATTTGAAGTTGATAGACTGCATACTGGATGTCATTTGGATTTCTGTCAGAAGGGCACAACACACAAGGGTAAGAGATTTCTAGCCCAGGTCAAGGGTTGTTTGCTGTGCCGGCGTGAGATTGTTGGAACAAGATTGTATGCAACAGTTGATTTAGACAAGGCAAGGGTTGGACGAACGAGGATGATAGGAAACCAACCCTCTCACCCAAAGTGGAACGAGAGCTTTGAAATCTACTGTGCCCATCGTATCTCAAACGTGATATTCACTGTCAAAGATGGTAACCCAATTGGAGCGACTCTAATTGGAAGAGCCTATGTCCCTGTGGAGCAAGTTCGCAAGGGCCCCATAATTAAGAGGTGGGTTGAGATATTAGACGAAGAAGATCATCGTCCCGTGCCGGGTCACTCCAAAATCCGTGTCACCATGCAATTCAACAGTGTCACACAGGACACAACATGCTCATGGTCTCAGGGAATTCGCATGCCATTTTATGGAGTTCCTCGTACATTTTTCAATCAGAGAGAAGGTTGTCATGTTACTTTGTACCAAGATGCTCATGCCCCACGTGGCGTTGGCGTTGTCCCATATATTCCAATATCCCAAGGAAAAGACTACGTGCCCGCAAGATGTTGGGAGGACATTTACACTGCCATTATGGAGGCTAAGCATTTTGTTTACATAGCTGGTTGGTCTGTTTACACTGAAATAGCATTGGTTAGGGACAAAGACGAATCAAATATCACCCTCGGGGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTCAAGGTTCTTTTGCTTATTTGGAATGACAGAACTTCTGTAGCAGAATTCAAGAAAGAGGGCTTGATGGCAACTCATGATCAGGAAACTGCTGCTTACTTTAGAAACACGAAGGTGCATTGTGTTTTGTGTCCACGGAACCCGGATGATGGGAGAAGCATGATTCAAGGCTTTCAAGTATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTTGTTGATGCCCGTTCTGTAGGGTCATCACTGAAGCGAAGTGTCGTAAGTTTCATAGGTGGCCTTGATCTTTGTGACGGGAGGTATGATACTAGGGAGCATCCTCTATTTCCAACTTTGAATTCAGTGCATGTAAATGATTTCCATCAACCAAACTTCCCAAGTGCTTCTATTGATAAAGGTGGTCCTAGAGAGCCATGGCATGACATTCATTGCAAGCTAGGAGGTCCCATTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTAGGGAAGGAACTGCTATTCTCGCTTGATGATCTTGGTCACATTCTAGTCCACCCATCTGATGCACAAAAATCAGAAGTGGGAGAAGAAGACACATGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGCTGCTTTTGGCTTTCCCCAAGCCCCGGAGTTAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATATCATTGAGAGAAGTATTCAGGATGCCTACATTAATGCTATTAGGCGTGCAAAAAACTTCATCTACATTGAGAACCAATACTTCCTAGGGAGTTCATATGCTTGGCACGCAACTAATGACATTGTGGTTGAGAACATTGGTGCTTTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTAAGCAAGATAGAAGCAAAAGAGAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGTGATTCGGTTCAAGCAATATTAGATTGGCAGAGAAGAACCATTGAGATGATGTATTCCGACATTGCTGATGCCTTAGCAAAATTGGGCATTCAAGCACACCCTCGAGATTATTTAACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGGGACCCAGAGAGTATACTCCTCCACAGGAACCAGAGCCTGAGAGTAACTACAGAAGAGCACACGATTCTAGGAGGTTCATGATCTATGTTCATTCCAAAATGATGATAGTTGATGATGAATACATAATCGTTGGCTCTGCTAACATAAATCAAAGATCAATGGAGGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATGGGCGAGCCAGAGGGGAGATATATAGATTTCGACGTGCACTGTGGTATGAGCACCTTGGGGACCATGGTTTTGAGACAAAAACCTTGGACAATCCAGAACATTTGGAGTGCATAGGTCTTGTGAATAGGCTTGCAGAGGAGAATTGGGAGATGTACTCAAAGGAAACATTTGATGAATTTAGACCATTTCACCACCTCATGCGCTACCCTATACATGTAGCCCACGATGGAACCATAACAAATCTTCCTGGCTTTCAACATTTTCCTGACACCCAGGCTCGGATTTTGGGTTCCTGTTCAAATTTCCTTCCTGCAATTCTCACAACCTAG 2475 0.4396 MPELLHGILKVTIFEVDRLHTGCHLDFCQKGTTHKGKRFLAQVKGCLLCRREIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHRISNVIFTVKDGNPIGATLIGRAYVPVEQVRKGPIIKRWVEILDEEDHRPVPGHSKIRVTMQFNSVTQDTTCSWSQGIRMPFYGVPRTFFNQREGCHVTLYQDAHAPRGVGVVPYIPISQGKDYVPARCWEDIYTAIMEAKHFVYIAGWSVYTEIALVRDKDESNITLGELLKKKADEGVKVLLLIWNDRTSVAEFKKEGLMATHDQETAAYFRNTKVHCVLCPRNPDDGRSMIQGFQVSTMFTHHQKSVVVDARSVGSSLKRSVVSFIGGLDLCDGRYDTREHPLFPTLNSVHVNDFHQPNFPSASIDKGGPREPWHDIHCKLGGPIAWDVLYNFEQRWEKQVGKELLFSLDDLGHILVHPSDAQKSEVGEEDTWNVQLFRSIDGGAAAFGFPQAPELVAELGLVSGKDNIIERSIQDAYINAIRRAKNFIYIENQYFLGSSYAWHATNDIVVENIGALHLIPKELTLKIVSKIEAKERFSVYIVIPMWPEGVPESDSVQAILDWQRRTIEMMYSDIADALAKLGIQAHPRDYLTFFCLGKREHKGPREYTPPQEPEPESNYRRAHDSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMEGSRDSEIAMGAFQPRHLAWNGRARGEIYRFRRALWYEHLGDHGFETKTLDNPEHLECIGLVNRLAEENWEMYSKETFDEFRPFHHLMRYPIHVAHDGTITNLPGFQHFPDTQARILGSCSNFLPAILTT* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0958 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 372 IPR001736 GO:0003824
Pvu9g0958 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Pvu9g0958 824 Pfam C2 domain 9 135 IPR000008 -
Pvu9g0958 824 Gene3D Endonuclease Chain A 213 450 - -
Pvu9g0958 824 SUPERFAMILY Phospholipase D/nuclease 508 735 - -
Pvu9g0958 824 Gene3D C2 domain 6 167 IPR035892 -
Pvu9g0958 824 CDD C2_plant_PLD 4 157 - -
Pvu9g0958 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Pvu9g0958 824 PIRSF PLD_plant 1 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu9g0958 824 SMART pld_4 335 372 IPR001736 GO:0003824
Pvu9g0958 824 SMART pld_4 666 693 IPR001736 GO:0003824
Pvu9g0958 824 PANTHER PHOSPHOLIPASE D ALPHA 3 3 824 - -
Pvu9g0958 824 Pfam Phospholipase D C terminal 743 813 IPR024632 -
Pvu9g0958 824 PANTHER PHOSPHOLIPASE D 3 824 IPR015679 -
Pvu9g0958 824 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Pvu9g0958 824 SMART C2_3c 8 133 IPR000008 -
Pvu9g0958 824 Gene3D Endonuclease Chain A 488 709 - -
Pvu9g0958 824 Pfam Phospholipase D Active site motif 335 372 IPR001736 GO:0003824
Pvu9g0958 824 Pfam Phospholipase D Active site motif 667 693 IPR001736 GO:0003824
Pvu9g0958 824 SUPERFAMILY Phospholipase D/nuclease 178 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0958 Pvu-Chr9 14385072 14388517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0958 4 824 Phospholipase D Gene Family (Wang group) AT3G15730 62.065 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0958 K01115 - gmx:100794115 1399.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0958 9 14385072 14388517 Pvu10g1608 10 42409778 42414070 ECH
Pvu9g0958 9 14385072 14388517 Pvu5g1833 5 40017084 40022311 ECH
Pvu9g0958 9 14385072 14388517 Pvu9g0959 9 14396105 14399311 ECH
Pvu9g0958 9 14385072 14388517 Pvu9g0958 9 14385072 14388517 ECH