Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0953 ATGGGAAAGCATCGGTCTTTCTTGCATATTGTGGGCACCGTTCTCCTTTTGTGCAAATTTTGTTTTGCTGCGAATCAATATACTGGAAGGGTCTTACCCGGAGGAATAAAGGGTTCTCAAATGAATTGGATTGACAGAAATGGTGTATTCCTCGTATCAAACGAGGGGCAATTTTCCTTTGGCTTTGTCACCACAGCGAATGACACCACCTTGTTTCTACTTTCAATCGCCCACCTGGCTACTTCCAGGGTCGTTTGGTCTGCTAACAGAGCAGTTCCTGTTGCTAATTCCGACAATTTTGTGTTTGATGACAAGGGCAACGCCTTCTTGCAGAAAGATGGAACCGTGGTCTGGTCTACGAACACAAGCGGCAAAGGGGTTTCTTCAATGGAATTGCGTGACACTGGGAATTTGGTTTTGCTTGGGAGTGATAATAGTACAGTGATTTGGCAAAGTTTCGGCGTTCCAACAGATACTTTGTTGCCAACTCAGGAATTCACAGAGGGAATGAAACTCGTCAGTGATCCTAGCAAAAACAACTTGACCCATATTCTTGAGATCAAGTCTGGTGTTGTTGTTCTCTCCGCAAGCTTTGGAACTCCGCAGCCTTATTGGACCATGCAGACGGACAGCCGCAGAATCATCAACACGGGCGGCGATGAAGTGGCTTCGGCAAACATTAGTAAAAACTCATGGAGGTTCTATGACAAGAGCAAATCTCTGTTGTGGCAGTTCATTTTCTCTTCAGGTCCAGACTCAAATGCGACTTGGATTGCTGTTTTGGGGAGTGATGGCTTCATCACCTTCTCTACCCTCGGCAGTGGAGCGTCAAATGCTGCTTCTGAAAAAATTCCCGAAGATCCTTGCGGTATTCCAGAACCCTGTGAGGCATACTCCATATGCACAGCTAAAAGGTGTAGCTGCCCTTCTGTTATTCCTAATTGCAAAACTGGTTTTGACTCTCCTTGCGGTGGTGACTCAGAAAAATCCATTCAGTTGGTTAAAGCTGATGATGGACTCGATTACTTTGCGCTTCAATTCCTTCAACCGTTTTCCAAAACCGATTTGGCTGGTTGCCAAACATCTTGCAGTGGAAACTGTTCCTGCGTTGCTATGTTCTTCCACAGAAGTTCGGGAAATTGTTTCTTGTTGGACAGTGTAGGAAGCTTTGAGAAACCTGATTCTGATCCTGGTTATGTTTCTTATATCAAGGTCTCGAGTGAAGGAGGTTCTGGCTCGGGTTCTGGGGGCGGCGGAAGTGGCAATAAGCACACCATAGTTGTTGTGATCATTGTCATGATAACCTTGTTTGTCATTGGCGGTCTGGTCTTTTGGGGAGTTAGATACCAAAGAAGAAAGCAAAGGCTGCCCGAGTCTCCTACAGATGGTTCAGAAGAGGCCAATTTCTTGGAGAATTTAACCGGTATGCCAATCCGTTACAGCTACAAGGACCTTGAAACTGCCACTAATAACTTTTCTGTGAAGCTTGGGCAAGGGGGTTTTGGGTCAGTGTATAAGGGAGTTCTACCAGACGGAACTCAAATAGCAGTGAAGAAATTGGAGAGCATTGGACAAGGAAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCACCTCCATTTGGTTAGGCTCAAGGGATTCTGTGCTGATGGAACTCACAGGCTTCTTGCCTATGAGTACATGCCGAATGGCTCCTTGGATAAATGGATATTCAAGAAAAAAAAAGGTGAGTTTCTGTTGGATTGGGATACCAGGTTCAATATAGCTCTGGGAACAGCAAAAGGGCTTGCTTATCTGCACGAAGATTGTGACTCCAAGATTGTTCATTGTGACATCAAACCAGAAAATGTTCTGCTGGATGAACACTTCATGGCCAAGGTTTCGGATTTTGGGCTGGCTAAGCTCATGAACCGAGAACAAAGCCATGTTTTCACAACACTGAGGGGCACCAGGGGCTATCTTGCGCCGGAGTGGATAACAAACTACGCTATATCAGAGAAAAGCGATGTTTACAGCTATGGGATGGTGCTGTTGGAGATCATCGGGGGAAGGAAAAACTATGATGCAAATGAGTCTTCAGAGAAATCCCATTTCCCAACTTTTGCTTTCAAAATGATGGAAGAAGGGAAGCTGAGGGATATTTTTGACTCAGAGTTGAGAATTGACGAGAACGATGACAGGTTTCAATGTGCTATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCAATGAGGCCATCTATGAGTAGAGTTGTACAAATGTTGGAGGGTCTTTCTACTGTTCCTAACCCACCAATCACTTCTTTCTTGGGTTCTCGCCTTTATGCCACTGTCTTCAAATCCTCCAGTGAAGGGGCCACCTCTTCTGCTCCCTCCGACGGTAACAGTGATGCTTACCTCTCTGCTGTTCGTCTTTCAGGGCCTAGATAA 2445 0.4532 MGKHRSFLHIVGTVLLLCKFCFAANQYTGRVLPGGIKGSQMNWIDRNGVFLVSNEGQFSFGFVTTANDTTLFLLSIAHLATSRVVWSANRAVPVANSDNFVFDDKGNAFLQKDGTVVWSTNTSGKGVSSMELRDTGNLVLLGSDNSTVIWQSFGVPTDTLLPTQEFTEGMKLVSDPSKNNLTHILEIKSGVVVLSASFGTPQPYWTMQTDSRRIINTGGDEVASANISKNSWRFYDKSKSLLWQFIFSSGPDSNATWIAVLGSDGFITFSTLGSGASNAASEKIPEDPCGIPEPCEAYSICTAKRCSCPSVIPNCKTGFDSPCGGDSEKSIQLVKADDGLDYFALQFLQPFSKTDLAGCQTSCSGNCSCVAMFFHRSSGNCFLLDSVGSFEKPDSDPGYVSYIKVSSEGGSGSGSGGGGSGNKHTIVVVIIVMITLFVIGGLVFWGVRYQRRKQRLPESPTDGSEEANFLENLTGMPIRYSYKDLETATNNFSVKLGQGGFGSVYKGVLPDGTQIAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCADGTHRLLAYEYMPNGSLDKWIFKKKKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDEHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDANESSEKSHFPTFAFKMMEEGKLRDIFDSELRIDENDDRFQCAIKVALWCIQEDMSMRPSMSRVVQMLEGLSTVPNPPITSFLGSRLYATVFKSSSEGATSSAPSDGNSDAYLSAVRLSGPR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0953 814 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0953 814 PIRSF SRK 4 810 IPR024171 GO:0004674
Pvu9g0953 814 Gene3D - 45 154 IPR036426 -
Pvu9g0953 814 SMART blect_4 42 156 IPR001480 -
Pvu9g0953 814 Pfam Protein kinase domain 494 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0953 814 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Pvu9g0953 814 CDD B_lectin 44 153 IPR001480 -
Pvu9g0953 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 814 - -
Pvu9g0953 814 ProSiteProfiles Protein kinase domain profile. 490 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0953 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 209 IPR036426 -
Pvu9g0953 814 Gene3D Transferase(Phosphotransferase) domain 1 565 768 - -
Pvu9g0953 814 CDD PAN_AP_plant 351 405 - -
Pvu9g0953 814 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Pvu9g0953 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pvu9g0953 814 MobiDBLite consensus disorder prediction 789 814 - -
Pvu9g0953 814 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
Pvu9g0953 814 SUPERFAMILY Protein kinase-like (PK-like) 472 761 IPR011009 -
Pvu9g0953 814 CDD STKc_IRAK 496 763 - -
Pvu9g0953 814 Pfam D-mannose binding lectin 84 167 IPR001480 -
Pvu9g0953 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0953 Pvu-Chr9 14348559 14351391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0953 432 770 Receptor kinase-like Gene Family AT5G20050 45.531 5.00e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu9g0953 Pkinase 7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0953 - - gmx:100791158 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0522 1 5689506 5692664 Pvu9g0953 9 14348559 14351391 PCT