Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0947 ATGGCACAAGATATTGGTACTCCACCAGTTCCTTTTGATTTTGAACTCTTGGTTGGTGATCCTGAGAACCTTAGAACTGTCAAAGCCTCATCCAGCAGCACAGACCCATGGATTGAACCTGAAAGGTTAAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCGTGAAGTTGCTGCCAAGATGTTACCTCCTATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTGTGAATTATATTTTCATTGCCAAGGAGCGGCTAGGGTGTGCTGGCTACTTGGGATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGATCAGTTGGTGATAAGATGGCTAGACTAAGAGAGGGAAGGATTTCATTGGATGATGTTCTTAGGTATGGTATCGATCTGGCTCAAGGTATTATGGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATCCAACGTGCTTCTCAATGATACCGATCAAGCAATACTGGGAGATGTTGGTATTCCAAATCTTCTCTTTGGTTCCTCATTCCTAAGCTCAGATACTGCCAATAGGCTTGGTACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTGTATCTTTTGAAACAGATTCGTGGGGATTTGGATGCACTATTGTGGAAATGTTGATTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAGTATATCGATCGGTTGTTGACAAATATGAAAAACCCCAGATTCCTGGTGGCCTTCCATCTTCAGTTGAAAATGTCCTCAGTGGCTGCTTTGAATATGATTTGAGGAATCGCCCTTCAATGGTAGATATTCTGTCCGTCTTTAGAAGCTCACGGAATGCAGTAGTCAATGATGGAGGATGGAGATATCTTGGAGTTCCTAGAACTATAGCAAAATCAAGTAGCATGGGCTACACACAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGATACAGTGCGCTCTAGAAAGCCTTCCAATTCATGCAATACACAGAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTACTGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGAGTTCATGACCCTGTAAGGATTCATGCGTCAACTCTTGAACGACTCACCAATGGTTTAGGAGCTGGGGATTGGGTGCGCATCAAGGAAGAAGATGATAAACACTCGCCAGTGGGTATTCTTCATTCTATCAATCGTGATGGCAGGGTGACTGTTGGGTTTATAGGCCTACGATCTCTTTGGAAAGGAAACTCTGCAGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAATTTATTAGGCTGAAACCCAATGTTCTAAGTCCCCGGTTTGAATGGTCGCGTAGAAGGGGTGGTGCCTGGGCTACTGGTAAGATTTATTGGATCCTACCAAATGGATGTCTAGTTGTCAAGTTCCCAGGCATGTTGAACATCTGGGATGCACCAAGCACTTTTTTGGCTGATCCCTCTGAGGTTGATGTGGTTAATTTTAAGAATTGTCCAAATATGATAGAGAAGTATCAACACGTAGAGGATCACCACTGGGCTGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTAGTACTGTCAAACTAGGGATGTCAGTTGGAAAGAAAATTGGCAGGAACATGAATGTGAATGCAATAGAGAATGAAAGTCATTATACAGATAGCCAGAATGGTAGCAGCCCTACATGGACATCTTCTGTAGCTAACATCCTTTTCAGAGAAGGTGTTAACTTGCCCACTGGGCGGTAG 1863 0.4316 MAQDIGTPPVPFDFELLVGDPENLRTVKASSSSTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYREVAAKMLPPIREEHMKTALEKFCELYFHCQGAARVCWLLGISILNGRICIIMNFYEGSVGDKMARLREGRISLDDVLRYGIDLAQGIMELHSKGILVLNLKPSNVLLNDTDQAILGDVGIPNLLFGSSFLSSDTANRLGTPNYMAPEQWQPEVRGPVSFETDSWGFGCTIVEMLIGNQPWYGCPVGEVYRSVVDKYEKPQIPGGLPSSVENVLSGCFEYDLRNRPSMVDILSVFRSSRNAVVNDGGWRYLGVPRTIAKSSSMGYTQWFLSKDHLQVGDTVRSRKPSNSCNTQNMEVPEGNVVGTADHGFVLVRLHGVHDPVRIHASTLERLTNGLGAGDWVRIKEEDDKHSPVGILHSINRDGRVTVGFIGLRSLWKGNSAELEMAESYCVGQFIRLKPNVLSPRFEWSRRRGGAWATGKIYWILPNGCLVVKFPGMLNIWDAPSTFLADPSEVDVVNFKNCPNMIEKYQHVEDHHWAVRPVLIAFGLLSTVKLGMSVGKKIGRNMNVNAIENESHYTDSQNGSSPTWTSSVANILFREGVNLPTGR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0947 620 PANTHER OS06G0639500 PROTEIN 7 615 - -
Pvu9g0947 620 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Pvu9g0947 620 CDD STKc_PknB_like 44 309 - -
Pvu9g0947 620 ProSiteProfiles Protein kinase domain profile. 43 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0947 620 Pfam Protein tyrosine and serine/threonine kinase 43 305 IPR001245 GO:0004672|GO:0006468
Pvu9g0947 620 Pfam Mind bomb SH3 repeat domain 347 456 IPR040847 -
Pvu9g0947 620 Gene3D Transferase(Phosphotransferase) domain 1 129 318 - -
Pvu9g0947 620 PANTHER OS06G0639500 PROTEIN 7 615 - -
Pvu9g0947 620 SUPERFAMILY Protein kinase-like (PK-like) 40 308 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0947 Pvu-Chr9 14286831 14290950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0947 27 308 MAP Kinase Kinase Kinase AT2G17700 24.476 1.21e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pvu9g0947 PK_Tyr_Ser-Thr 5.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0947 - - gmx:100780636 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0947 9 14286831 14290950 Pvu9g0947 9 14286831 14290950 ECH
Pvu9g0947 9 14286831 14290950 Pvu1g0518 1 5643483 5651744 ECH
Pvu1g0518 1 5643483 5651744 Pvu9g0947 9 14286831 14290950 PCT