Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0935 ATGGGAAAACCCACAGGGAAGAAGAAGGGTATCGATGCTACTCCGGGTGCTGCAAATTCACACGCCAAATCTGCCAAGTCCTCCAAAGCTTTCGATGAAGACACGGCAATGTTCATTAACATGTCACAAGAGTTCAGGGAAGAAGGTAACAAATTGTTTCAGAAGAAGGACCACGAAGGCGCTATGCTCAAGTACGAGAAGGCACTGAAGCTGCTTCCGAAGAACCACATAGATGTCGCACACCTTCGTACTAACATGGCCACGTGTTACATGCAATTGGGTCTCGGGGAATACCCTCGAGCCATTCACGAATGCAATTTGGCGCTGGAAGTGTCTCCAAAGTACAGCAAAGCTCTTCTGAAAAGAGCCACATGCTATCGTGAGCTTAATCGCCTTGATTTGGCGCTCAGGGATGTCAATCTTGTTTTGAGCATGGAGCCAAATAATCTCACAGCGTTGGAATCTCTCGAGAGTCTCACGAAGTCAAGGGAAGAAAAGGGGGTCTCTGTTGATGATAAAAGGATGGCTTTTGATACCACCGTTTATCACTCTCCTTCTCATTCTTCGCAAAAACTGAAGAAAAAGAGAGGTAAAAAAATTGAGGACAAGGTGATTGTGAAGGAAAACCTGGGTGTTATTGTTGAGGATAAAAAGGTGGTTTCTAAAACAATTGGGCAAGAAAGCAAGGTGGTTTCAAAAGCAATTGAGCACGAAAAAAAGGTGGATTCAAAAGCAATTGAGCACGAAAAAAAGGTGGTGGAAGTCGAACCTGTGGAGGAAGAAAAACCTGTCACGATCACGAGGAGCGTCAAGTTGGTGTTTGGAGAAGATATAAGGTGGGCTCACTTACCCGTGAATTGTAGTGCGAAGTTGGTGAGGGATATAGCTAGGGACCGGTTTCCGGGTTTGAAGGGAGTTCTTGTCAAGTATAAGGATAAAGAAGGTGATTTGGTTACTATCACTACTACAGATGAACTGAGGTTAGCTGAAAAGTCTGCTCCTGAGAAGACATCGTTTAGGCTTTATATTACCGAGGTCAGTCCAGATCAAGAACCTTCTTATGATGGAACAACAACCAACGGGGATGAGGTGCAAAGGGATGGTGGAAAAAGAAATGATGGTGTTGAGAATACGGGTATGGAAGGAGGCAGAGATGAAGATGCTGCAAAAAGGATACTTGCTGTGGAGGATTGGCTTCTCCAGTTTGCAAGGCTGTTCAAGAACCATGTAGGGTTTGAGTCAGATTCTTATCTAGATACTCATGAGTTTGCAATGAAGCTGTACGGAGAAGCGATGGAGGATACGGTAGCAAGCACTGAGGCTCAAGAACTTTTTGGAATTGCTGCTGATAAATTTCAAGAGATGGCTGCCTTGGCACTGTTTAATTGGGGAAGTGTTCAAATGTCCAGGGCAAGGAACCAAGGTTCTTTTTCGGAGGATGGGACCAGAGAGTCTTCCTTGGAACATATAAAAGCTGCATATGAGTTGGCACGAAGGGAGTACGAGAAAGCAGAAATGAGATATGAAGAAGCCTTGAAAATCAAACCTGACTTCTACGATGGATATCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAGGCTGTGCTGGTGTTATGCATTGGCATGCAAGGACTCAGATGCTGGCTTTTCTGAAGAGGTTCTACAACTTTATAACAAGGCAGAGGATAGCATGGAGAAAGGCATCTTGATGTGGGAGGAGGCTGAGGAGCAGCGTTTGAATGGAATATCCAAATCAGATAAGTATAGAGAACAGTTAGAGAAAATGGGGTTGGATGGTCTTGTCAAAGATGTTTCTGATGATGAAGCTTCAAAGCAGGCTGCAAAGATGAGGTCTCAGATACACCTTCTATGGGGAACCTTGTTGTATGAACGTTCTGTTGTGGAATATAAGCTTGGCCTTCCCACATGGGAGGAATGTTTGGAGGTTGCAGTTGAAAAGTTTGAACTGGCTGGAACTTCTGGAACAGATATTGCTTTCATTGTAAAGAATCACTGCTCAAATGAAACAGCACTTGAAGGGTTCAAAATTGATGAGATAGTACAGGCATGGAATGAGATGTACGATGCTCAGGGGTGGCAGTTTGGTGATCCATCATTTCGACTTGAACCATTGTTTCGTCGGCGTGTTCCTAAACTTCATTCCATCTTGGAGCAGTTTTAA 2184 0.4428 MGKPTGKKKGIDATPGAANSHAKSAKSSKAFDEDTAMFINMSQEFREEGNKLFQKKDHEGAMLKYEKALKLLPKNHIDVAHLRTNMATCYMQLGLGEYPRAIHECNLALEVSPKYSKALLKRATCYRELNRLDLALRDVNLVLSMEPNNLTALESLESLTKSREEKGVSVDDKRMAFDTTVYHSPSHSSQKLKKKRGKKIEDKVIVKENLGVIVEDKKVVSKTIGQESKVVSKAIEHEKKVDSKAIEHEKKVVEVEPVEEEKPVTITRSVKLVFGEDIRWAHLPVNCSAKLVRDIARDRFPGLKGVLVKYKDKEGDLVTITTTDELRLAEKSAPEKTSFRLYITEVSPDQEPSYDGTTTNGDEVQRDGGKRNDGVENTGMEGGRDEDAAKRILAVEDWLLQFARLFKNHVGFESDSYLDTHEFAMKLYGEAMEDTVASTEAQELFGIAADKFQEMAALALFNWGSVQMSRARNQGSFSEDGTRESSLEHIKAAYELARREYEKAEMRYEEALKIKPDFYDGYLALGHQQFEQARLCWCYALACKDSDAGFSEEVLQLYNKAEDSMEKGILMWEEAEEQRLNGISKSDKYREQLEKMGLDGLVKDVSDDEASKQAAKMRSQIHLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGTSGTDIAFIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWQFGDPSFRLEPLFRRRVPKLHSILEQF* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0935 727 MobiDBLite consensus disorder prediction 364 384 - -
Pvu9g0935 727 Gene3D Tetratricopeptide repeat domain 34 181 IPR011990 GO:0005515
Pvu9g0935 727 SMART tpr_5 80 115 IPR019734 GO:0005515
Pvu9g0935 727 SMART tpr_5 42 75 IPR019734 GO:0005515
Pvu9g0935 727 SMART tpr_5 485 518 IPR019734 GO:0005515
Pvu9g0935 727 SMART tpr_5 116 149 IPR019734 GO:0005515
Pvu9g0935 727 Coils Coil 487 514 - -
Pvu9g0935 727 ProSiteProfiles TPR repeat profile. 42 75 IPR019734 GO:0005515
Pvu9g0935 727 PANTHER PROTEIN PHOX4 1 726 - -
Pvu9g0935 727 ProSiteProfiles PB1 domain profile. 267 346 IPR000270 GO:0005515
Pvu9g0935 727 Gene3D - 258 346 - -
Pvu9g0935 727 SMART PB1_new 267 346 IPR000270 GO:0005515
Pvu9g0935 727 Pfam PB1 domain 267 344 IPR000270 GO:0005515
Pvu9g0935 727 PANTHER PROTEIN CLMP1 1 726 IPR044517 -
Pvu9g0935 727 MobiDBLite consensus disorder prediction 348 384 - -
Pvu9g0935 727 SUPERFAMILY TPR-like 456 620 IPR011990 GO:0005515
Pvu9g0935 727 SUPERFAMILY CAD & PB1 domains 266 355 - -
Pvu9g0935 727 SUPERFAMILY TPR-like 33 157 IPR011990 GO:0005515
Pvu9g0935 727 CDD PB1 270 343 - -
Pvu9g0935 727 ProSiteProfiles TPR repeat profile. 116 149 IPR019734 GO:0005515
Pvu9g0935 727 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0935 Pvu-Chr9 14117685 14122459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0935 26 149 Calmodulin-binding Proteins AT3G25230 31.579 8.46e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0935 - - gmx:100805760 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0507 1 5495888 5500021 Pvu9g0935 9 14117685 14122459 PCT