Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0914 ATGGAAACACTGAGCTACGAGGCTCCCTTCTATGATAGCCTTTCTGCTGTGGAGACTCCTCCAAGTCCAAGCACACCATTGCAGAATCCACAGGAGAAGAAACAGCTATCTGTTGAGGAAGAGGAAGAAGAAGAAAAAGAGACAAAAACAGGTACTTTACTGGATCTAAATATCCCTGGTGATGATTCGGCTACTGAGTGCAGTCCAGTGCTGAATCTCATCACTTGTCTGAACACGGATTTGTCATCAGAAAACCCCCATGAGCCACGGGTGTTCTCTTGCAACTACTGTCATAGGAAGTTCTACAGTTCACAAGCTCTAGGAGGACACCAAAATGCTCACAAAAGAGAGAGGTCAGTAGCAAAAAGAGGTCACAGATCAGCATCAGCCATGATGGCCCCAGCAACAGCTTTTGGAATTCCCTTTCTCCACAATCACCTTCCTCACTATGCCACTGTGGCTTCTCTGCCTCTCCATGGTGCTTGTATTAATAAACCACTTGGAATTCAGGCTCACTGTATGATTCACAAGCCTCCTCCTCCTCCTCCTTCTTCTCATCTTTCATTCAATGGATTTTCAAACACTATTGGACATCATCATCATGGGTGGTCAAGGTCAAGACCCCTTATTACTCAACAACCTGGAATAGGGAAGTTAACTATGGAAAGTTGTCACAAAACATCAAGAGGCAGTTTTGGGAGATTAGAAGCGGGGAGCACCATGCTCAATTCAGCAGTTAATGAAGAAATAAGTGAATATCTGGTTAGTGAAAATGTTAGTTTTAAGAGTAGTCAAGAACAAAAGCAACATCTTGACTTGTCCCTAAAGCTCTAA 834 0.4365 METLSYEAPFYDSLSAVETPPSPSTPLQNPQEKKQLSVEEEEEEEKETKTGTLLDLNIPGDDSATECSPVLNLITCLNTDLSSENPHEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSVAKRGHRSASAMMAPATAFGIPFLHNHLPHYATVASLPLHGACINKPLGIQAHCMIHKPPPPPPSSHLSFNGFSNTIGHHHHGWSRSRPLITQQPGIGKLTMESCHKTSRGSFGRLEAGSTMLNSAVNEEISEYLVSENVSFKSSQEQKQHLDLSLKL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0914 277 MobiDBLite consensus disorder prediction 1 57 - -
Pvu9g0914 277 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 277 IPR044246 GO:0009788
Pvu9g0914 277 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 277 - -
Pvu9g0914 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Pvu9g0914 277 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
Pvu9g0914 277 MobiDBLite consensus disorder prediction 17 33 - -
Pvu9g0914 277 Gene3D Classic Zinc Finger 76 137 - -
Pvu9g0914 277 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0914 Pvu-Chr9 13848370 13849558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0914 15 277 C2H2 Transcription Factor Family AT5G10970 36.655 3.86e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu9g0914 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0914 - - vra:106761491 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0473 1 5003968 5004834 Pvu9g0914 9 13848370 13849558 PCT