Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0905 ATGGCAAAGTGTCACCGGAATAACGTCGGATCCATCGCTCTCGACCACCGACACACGGCAAAAAATGCCACCGCTGGCAGCCACTTCCGCGTGCTCCGCCGCTTGATCTTCGACGCCGTCAGCTGCGGCGGCACCTCTCGCTACCGGTATCGCCAGCGTGGCAGCGAGGATGGAGACGTTGGCGACTTTAGCTCGGAGGCTAGCCATGCAGAGAAGGAGGAGAGGTCGGAGAAGAGGTCGGAGAAGCTGTCGGATCTGCTGAACGCGGCGGAGATGAAAACGGAGGCGGAGGCGGAGAGGAAGGAGGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGACCTCACGATGCGGAGAATCGCGGCGGCGAGAGTGAGGTCGCTAGCCAAGGAAGATTCCGAAGCGAGAGCGAATCTCGCAATGCTAGGAGCAATTCCCCCTCTCGTCGGAATGCTCGATTCGGAAGACGCTAATTCGCAAATCGCTTCGCTCTACGCTTTGCTCAATCTCGGAATCGGCAACGATGCAAACAAAGCGGCTATAGTGAAAATAGGCACTGTACACAAGATGCTGAAGCTAGTTGAGTCGAGTGATTCGGATTCGTCGGTGGCCGAAGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCGAATAAACCGATAATTGGATCCTCCGGTGCAATACCGTTCCTGGTTAGCACCCTGAAAAATTTAGACGCCACTAAAACCGTATCAGAATCCCAGTCGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCGATCTGTCAGAGCAACGTTTCGGTGGTTTTGGAGACTGATTTGGTTTGGTTTTTAGTGAGCGCGATGGGGGACATGGAAGTGAGCGAGAGGAGTCTGGCGATTCTGAGCAATTTAGTGTCGACTCCAGAGGGAAGAAAAGCGATCAGTGGTGTGAGGGACGCGATTCCGATTCTGGTGGATGTGTTGAGTTGGACGGACTCGCCGGAGTGCCAAGAGAAGGCGTCGTATGTGCTGATGATTATGGCACACAGAACATACGGGGACAGGCTGGCCATGATCGAGGCAGGGGTTGTGTCGTCGCTGCTTGAGTTGACGCTTGTCGGAACCACGTTAGCTCAGAAGAGGGCCTCCAGAATATTGGAGTGTTTGAGGGTGGATAAAGGGAAACAGGTCTCTAGGAGCTACGCTGCAAACTTGAATTTGGGTGTCTCTGCTCCTATTTGTGGTGGCTCTTCTTCATCCGAGGGTGGTGGTGGAGGACGAGGAAAAGGGTCCTTGGTGGAGGAGGAAGATGGAATGGTGATGAGTGAGGAAAAGAAAGCGGTGAAACAGTTAGTGCAGCAGAGTCTGCAGAATAACATGATTAAAATCGTGAAGAGGGCCAACTTGCGTCAGGATTTCGTTCCATCTGCCCAAATTGCTTCACTCACTTTGAGTTCCACTTCAAAGAGCCTCCCATTTTGA 1494 0.5295 MAKCHRNNVGSIALDHRHTAKNATAGSHFRVLRRLIFDAVSCGGTSRYRYRQRGSEDGDVGDFSSEASHAEKEERSEKRSEKLSDLLNAAEMKTEAEAERKEEALAELKRVVKELREEDLTMRRIAAARVRSLAKEDSEARANLAMLGAIPPLVGMLDSEDANSQIASLYALLNLGIGNDANKAAIVKIGTVHKMLKLVESSDSDSSVAEAIVANFLGLSALDSNKPIIGSSGAIPFLVSTLKNLDATKTVSESQSQVKQDALRALYNLSICQSNVSVVLETDLVWFLVSAMGDMEVSERSLAILSNLVSTPEGRKAISGVRDAIPILVDVLSWTDSPECQEKASYVLMIMAHRTYGDRLAMIEAGVVSSLLELTLVGTTLAQKRASRILECLRVDKGKQVSRSYAANLNLGVSAPICGGSSSSEGGGGGRGKGSLVEEEDGMVMSEEKKAVKQLVQQSLQNNMIKIVKRANLRQDFVPSAQIASLTLSSTSKSLPF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0905 497 MobiDBLite consensus disorder prediction 50 81 - -
Pvu9g0905 497 Gene3D - 76 251 IPR011989 -
Pvu9g0905 497 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 497 - -
Pvu9g0905 497 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 497 - -
Pvu9g0905 497 SMART arm_5 222 271 IPR000225 GO:0005515
Pvu9g0905 497 SMART arm_5 272 310 IPR000225 GO:0005515
Pvu9g0905 497 SMART arm_5 179 221 IPR000225 GO:0005515
Pvu9g0905 497 SMART arm_5 311 353 IPR000225 GO:0005515
Pvu9g0905 497 SMART arm_5 137 177 IPR000225 GO:0005515
Pvu9g0905 497 Coils Coil 73 121 - -
Pvu9g0905 497 Gene3D - 252 410 IPR011989 -
Pvu9g0905 497 SUPERFAMILY ARM repeat 80 393 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0905 Pvu-Chr9 13765724 13767835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0905 103 394 U-box Gene Family AT2G23140 33.898 4.61e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0905 - - gmx:100818576 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0467 1 4866808 4870189 Pvu9g0905 9 13765724 13767835 PCT