Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0897 ATGTCCCTTAATTCTGAAGCAAATCTTTCTTCCATGGAACCAACCTGTGTCGACACTTCTCTCAACCTTAACGTTATTCCCTCTTCACACATAGACGTCGCGGGGGAATTTTTGGTTGAAGAGTTGAGGCGTCTAAATAGTGAGAACAAGAGGCTATCTGAGACGCTGAAGCACGTATGCGAGAGCTATGTTGCTTTGCAGAAACATGTGAGTGAGTTCAACCTACTGAAGAACGCAGATTTTGAGAAAGAAGAAAAACCATCCCCCAAAAGAAAGGTCGAGAATGGCGTCAACGCGTATGCAGAGTGCAACACTGAGGAAGAGACATTCAAAAGGCCTAAGCAAAGTACCACCCCAAAGGTTTCCAAAGTGTTTGTACGGACAGATGCATCTGATACCAGCTTATATGTGAGGGACGGATACCAGTGGAGAAAATATGGTCAAAAAGTCACCAGAGATAACCCCTCTCCTAGGGCTTACTTCAAGTGTTCCTATGCCCCAGGATGTCCAGTGAAGAAGAAGGTGCAGAGAAGCGTGGAGGATCCTACTGTGTTGGTAACGACTTACGAAGGAGAGCACAACCATGGTGAACATGAAATGGAGATATCAGGGAAAAGTGAAAGCCCTGGTGGTGGTGGTGGTGGTGGTACAGGGTCAGTAGGTTGCAGTCGCTCAGCCTCGTCGGGTCGAATTGAAGCGCTTGAATTAGTCCACTCGAGAGTGGTTGACATGAATGCGCAAAAGTCATGGATCCATCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACCAGAGATCCTAATTTCACAGCAGCACTTGCTTCTGCCATCTCAGGAAGAATTCTAGATGATACTTCTATGTCAAAACGTTGA 873 0.4582 MSLNSEANLSSMEPTCVDTSLNLNVIPSSHIDVAGEFLVEELRRLNSENKRLSETLKHVCESYVALQKHVSEFNLLKNADFEKEEKPSPKRKVENGVNAYAECNTEEETFKRPKQSTTPKVSKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPGCPVKKKVQRSVEDPTVLVTTYEGEHNHGEHEMEISGKSESPGGGGGGGTGSVGCSRSASSGRIEALELVHSRVVDMNAQKSWIHQFLVQQMATSLTRDPNFTAALASAISGRILDDTSMSKR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0897 290 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 283 IPR044810 GO:0003700
Pvu9g0897 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 283 - -
Pvu9g0897 290 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0897 290 MobiDBLite consensus disorder prediction 191 224 - -
Pvu9g0897 290 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0897 290 SUPERFAMILY WRKY DNA-binding domain 134 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0897 290 ProSiteProfiles WRKY domain profile. 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0897 290 Gene3D WRKY domain 120 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0897 290 Coils Coil 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0897 Pvu-Chr9 13639295 13640736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0897 17 281 WRKY Transcription Factor Family AT1G80840 43.706 2.07e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g0897 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0897 - - gmx:100127373 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0428 1 4312182 4314073 Pvu9g0897 9 13639295 13640736 PCT